Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 UNC93B3-201ENST00000308076 687 ntBASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHA9Q9Y5H5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHA9Q9Y5H5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHA9Q9Y5H5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PCDHA9Q9Y5H5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 AC010525.1-201ENST00000585559 441 ntBASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHA9Q9Y5H5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 AC068587.7-201ENST00000641602 218 ntBASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PCDHA9Q9Y5H5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHA9Q9Y5H5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHA9Q9Y5H5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 AL136162.1-201ENST00000607711 1078 ntBASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHA9Q9Y5H5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 Z98882.1-201ENST00000622160 2253 ntBASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 SLC47A1P1-202ENST00000449666 945 ntBASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 AC024257.2-201ENST00000549699 147 ntBASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHA9Q9Y5H5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms