Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGA11Q9Y5H2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHGA11Q9Y5H2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHGA11Q9Y5H2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
PCDHGA11Q9Y5H2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.77■□□□□ 0.91
PCDHGA11Q9Y5H2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 FAM99A-202ENST00000538190 1989 ntBASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 AC233992.3-201ENST00000607491 485 ntBASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.76■□□□□ 0.91
PCDHGA11Q9Y5H2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 PKD1P6-201ENST00000343738 4769 ntBASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHGA11Q9Y5H2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 AC096631.2-201ENST00000436136 790 ntBASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PCDHGA11Q9Y5H2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 SLC25A24-204ENST00000569674 2357 ntBASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGA11Q9Y5H2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms