Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 SNX5-217ENST00000606557 1087 ntBASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 AC009086.3-201ENST00000623486 1008 ntBASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGB1Q9Y5G3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB1Q9Y5G3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB1Q9Y5G3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 CA15P2-201ENST00000611168 834 ntBASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGB1Q9Y5G3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 GUSBP5-201ENST00000418136 578 ntBASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGB1Q9Y5G3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 AC103834.1-201ENST00000520383 144 ntBASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGB1Q9Y5G3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms