Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 AC007952.6-201ENST00000573168 2673 ntBASIC20.25■□□□□ 0.83
AP4S1Q9Y587 AC003957.1-201ENST00000625108 2673 ntBASIC20.25■□□□□ 0.83
AP4S1Q9Y587 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP4S1Q9Y587 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 AC004687.1-201ENST00000579003 1625 ntBASIC20.24■□□□□ 0.83
AP4S1Q9Y587 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 KRT18P24-201ENST00000344739 1156 ntBASIC20.24■□□□□ 0.83
AP4S1Q9Y587 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP4S1Q9Y587 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.23■□□□□ 0.83
AP4S1Q9Y587 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP4S1Q9Y587 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 AC129492.7-201ENST00000622992 756 ntBASIC20.22■□□□□ 0.83
AP4S1Q9Y587 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP4S1Q9Y587 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
AP4S1Q9Y587 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
AP4S1Q9Y587 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms