Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR3Q9UNL2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 AC019171.1-201ENST00000601251 1056 ntBASIC19.09■□□□□ 0.65
SSR3Q9UNL2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SSR3Q9UNL2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SSR3Q9UNL2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.08■□□□□ 0.64
SSR3Q9UNL2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR3Q9UNL2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 MIR7108-201ENST00000614319 87 ntBASIC19.07■□□□□ 0.64
SSR3Q9UNL2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SSR3Q9UNL2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 AC007952.6-201ENST00000573168 2673 ntBASIC19.06■□□□□ 0.64
SSR3Q9UNL2 AC003957.1-201ENST00000625108 2673 ntBASIC19.06■□□□□ 0.64
SSR3Q9UNL2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 MIR4281-201ENST00000580852 62 ntBASIC19.06■□□□□ 0.64
SSR3Q9UNL2 AC104564.3-201ENST00000582367 638 ntBASIC19.06■□□□□ 0.64
SSR3Q9UNL2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 RNF165-205ENST00000588679 2904 ntBASIC19.06■□□□□ 0.64
SSR3Q9UNL2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR3Q9UNL2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR3Q9UNL2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR3Q9UNL2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR3Q9UNL2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms