Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ABCF3Q9NUQ8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ABCF3Q9NUQ8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ABCF3Q9NUQ8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.71■■□□□ 1.07
ABCF3Q9NUQ8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.71■■□□□ 1.07
ABCF3Q9NUQ8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ABCF3Q9NUQ8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.7■■□□□ 1.07
ABCF3Q9NUQ8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ABCF3Q9NUQ8 AC144652.1-201ENST00000609974 1624 ntBASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
ABCF3Q9NUQ8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.68■■□□□ 1.06
ABCF3Q9NUQ8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ABCF3Q9NUQ8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 AC131281.2-201ENST00000520478 145 ntBASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 LINC01521-201ENST00000504184 1943 ntBASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ABCF3Q9NUQ8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 C17orf82-201ENST00000623772 1530 ntBASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ABCF3Q9NUQ8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCF3Q9NUQ8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 SRD5A1P1-201ENST00000442297 786 ntBASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 AL512631.2-201ENST00000604634 923 ntBASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 MIR4466-201ENST00000606121 54 ntBASIC21.64■■□□□ 1.05
ABCF3Q9NUQ8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms