Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
A1CFQ9NQ94 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 NCF1B-203ENST00000435988 1254 ntBASIC24.56■■□□□ 1.52
A1CFQ9NQ94 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.56■■□□□ 1.52
A1CFQ9NQ94 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
A1CFQ9NQ94 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 DUX4L16-201ENST00000555130 1264 ntBASIC24.54■■□□□ 1.52
A1CFQ9NQ94 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 AC087742.1-201ENST00000575880 1738 ntBASIC24.54■■□□□ 1.52
A1CFQ9NQ94 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
A1CFQ9NQ94 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.53■■□□□ 1.52
A1CFQ9NQ94 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 AL109923.1-201ENST00000618799 583 ntBASIC24.52■■□□□ 1.52
A1CFQ9NQ94 MYCNOS-205ENST00000641950 531 ntBASIC24.52■■□□□ 1.52
A1CFQ9NQ94 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
A1CFQ9NQ94 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AC137767.1-201ENST00000602918 1920 ntBASIC24.51■■□□□ 1.51
A1CFQ9NQ94 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AC010141.2-201ENST00000452426 721 ntBASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AL034346.1-201ENST00000568244 1277 ntBASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.51■■□□□ 1.51
A1CFQ9NQ94 AL050303.2-201ENST00000619798 666 ntBASIC24.51■■□□□ 1.51
A1CFQ9NQ94 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
A1CFQ9NQ94 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.5■■□□□ 1.51
A1CFQ9NQ94 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms