Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNX25Q9H3E2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.91■■□□□ 1.26
SNX25Q9H3E2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.9■■□□□ 1.26
SNX25Q9H3E2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SNX25Q9H3E2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SNX25Q9H3E2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SNX25Q9H3E2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.89■■□□□ 1.26
SNX25Q9H3E2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.89■■□□□ 1.26
SNX25Q9H3E2 AC012676.1-201ENST00000574705 1949 ntBASIC22.89■■□□□ 1.25
SNX25Q9H3E2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 AC079140.4-201ENST00000507448 529 ntBASIC22.89■■□□□ 1.25
SNX25Q9H3E2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SNX25Q9H3E2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 NTF6G-201ENST00000591094 616 ntBASIC22.88■■□□□ 1.25
SNX25Q9H3E2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SNX25Q9H3E2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 KRT18P5-201ENST00000436075 1291 ntBASIC22.87■■□□□ 1.25
SNX25Q9H3E2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 AC092053.2-201ENST00000640557 1818 ntBASIC22.87■■□□□ 1.25
SNX25Q9H3E2 GUSBP5-202ENST00000510805 1989 ntBASIC22.87■■□□□ 1.25
SNX25Q9H3E2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SNX25Q9H3E2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.86■■□□□ 1.25
SNX25Q9H3E2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms