Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP3Q9BZ76 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP3Q9BZ76 AC008694.1-202ENST00000636953 945 ntBASIC20.57■□□□□ 0.88
CNTNAP3Q9BZ76 AC097493.4-201ENST00000641197 219 ntBASIC20.57■□□□□ 0.88
CNTNAP3Q9BZ76 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 AL512625.2-201ENST00000417533 625 ntBASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 AL049597.2-201ENST00000565575 961 ntBASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNTNAP3Q9BZ76 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP3Q9BZ76 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 CD177P1-201ENST00000606252 935 ntBASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 AC012306.2-201ENST00000609350 630 ntBASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP3Q9BZ76 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 KRT17P2-201ENST00000300992 1314 ntBASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP3Q9BZ76 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 DUSP8P4-201ENST00000399538 1761 ntBASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 TSPY7P-201ENST00000431358 1114 ntBASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP3Q9BZ76 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
CNTNAP3Q9BZ76 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CNTNAP3Q9BZ76 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP3Q9BZ76 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP3Q9BZ76 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 AC069236.1-201ENST00000604339 616 ntBASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP3Q9BZ76 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.5■□□□□ 0.87
CNTNAP3Q9BZ76 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms