Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 GFER-205ENST00000569451 517 ntTSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LCE3DQ9BYE3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 GOLGA2P6-201ENST00000340929 2049 ntBASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 AC026202.3-201ENST00000600805 1127 ntBASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 RNF165-205ENST00000588679 2904 ntBASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LCE3DQ9BYE3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
LCE3DQ9BYE3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC5.77□□□□□ -1.49
LCE3DQ9BYE3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms