Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCD1Q96GM5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 AC233723.2-201ENST00000623798 2106 ntBASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCD1Q96GM5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCD1Q96GM5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.64■■□□□ 1.22
SMARCD1Q96GM5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCD1Q96GM5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SMARCD1Q96GM5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AP004607.4-201ENST00000530158 1459 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 KRT87P-202ENST00000534226 1464 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 KRT18P61-201ENST00000585825 1298 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AC092666.2-201ENST00000613287 246 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AC092053.2-201ENST00000640557 1818 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 AC004854.2-201ENST00000608450 1441 ntBASIC22.63■■□□□ 1.21
SMARCD1Q96GM5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.62■■□□□ 1.21
SMARCD1Q96GM5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 AC242852.2-201ENST00000615738 1807 ntBASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 GUSBP5-202ENST00000510805 1989 ntBASIC22.61■■□□□ 1.21
SMARCD1Q96GM5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 AC022517.1-201ENST00000592429 346 ntBASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMARCD1Q96GM5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
SMARCD1Q96GM5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMARCD1Q96GM5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMARCD1Q96GM5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms