Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 AF131216.4-201ENST00000638924 1588 ntBASIC16.85■□□□□ 0.29
MBD3L1Q8WWY6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.84■□□□□ 0.29
MBD3L1Q8WWY6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.83■□□□□ 0.29
MBD3L1Q8WWY6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 MIR6765-201ENST00000614092 87 ntBASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 AL391422.3-201ENST00000603791 2761 ntBASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L1Q8WWY6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 AC022616.5-201ENST00000518796 181 ntBASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L1Q8WWY6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 C17orf82-201ENST00000623772 1530 ntBASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 AL049796.1-201ENST00000565336 1766 ntBASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L1Q8WWY6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 AP005212.1-201ENST00000581547 1997 ntBASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 DUX4L4-201ENST00000566884 1269 ntBASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MBD3L1Q8WWY6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms