Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.68■□□□□ 0.74
SETD9Q8NE22 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SETD9Q8NE22 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.68■□□□□ 0.74
SETD9Q8NE22 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SETD9Q8NE22 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.68■□□□□ 0.74
SETD9Q8NE22 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SETD9Q8NE22 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.67■□□□□ 0.74
SETD9Q8NE22 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.67■□□□□ 0.74
SETD9Q8NE22 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.67■□□□□ 0.74
SETD9Q8NE22 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.67■□□□□ 0.74
SETD9Q8NE22 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.67■□□□□ 0.74
SETD9Q8NE22 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SETD9Q8NE22 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 AC004687.1-201ENST00000579003 1625 ntBASIC19.66■□□□□ 0.74
SETD9Q8NE22 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 AC139795.1-202ENST00000500444 432 ntBASIC19.66■□□□□ 0.74
SETD9Q8NE22 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SETD9Q8NE22 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SETD9Q8NE22 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 FEM1AP1-201ENST00000431297 1995 ntBASIC19.65■□□□□ 0.74
SETD9Q8NE22 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 AC129492.7-201ENST00000622992 756 ntBASIC19.65■□□□□ 0.74
SETD9Q8NE22 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SETD9Q8NE22 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
SETD9Q8NE22 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SETD9Q8NE22 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SETD9Q8NE22 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SETD9Q8NE22 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SETD9Q8NE22 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.64■□□□□ 0.74
SETD9Q8NE22 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SETD9Q8NE22 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.64■□□□□ 0.73
SETD9Q8NE22 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.63■□□□□ 0.73
SETD9Q8NE22 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
SETD9Q8NE22 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.63■□□□□ 0.73
SETD9Q8NE22 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.63■□□□□ 0.73
SETD9Q8NE22 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 SNX5-217ENST00000606557 1087 ntBASIC19.63■□□□□ 0.73
SETD9Q8NE22 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SETD9Q8NE22 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SETD9Q8NE22 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SETD9Q8NE22 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms