Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 AC242852.2-201ENST00000615738 1807 ntBASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC144CPQ8IYA2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 AC123595.1-201ENST00000440769 1046 ntBASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 AL354811.1-201ENST00000610286 706 ntBASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CCDC144CPQ8IYA2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC144CPQ8IYA2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.33■■□□□ 1.64
CCDC144CPQ8IYA2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC144CPQ8IYA2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC144CPQ8IYA2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.31■■□□□ 1.64
CCDC144CPQ8IYA2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC144CPQ8IYA2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 ECEL1P1-201ENST00000373592 1742 ntBASIC25.29■■□□□ 1.64
CCDC144CPQ8IYA2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC144CPQ8IYA2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms