Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 AC092053.2-201ENST00000640557 1818 ntBASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 AP004607.7-201ENST00000527152 1677 ntBASIC21.58■■□□□ 1.05
LYSMD3Q7Z3D4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.58■■□□□ 1.04
LYSMD3Q7Z3D4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 RARRES2P6-201ENST00000567333 442 ntBASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD3Q7Z3D4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD3Q7Z3D4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 BX005040.4-201ENST00000637145 1518 ntBASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD3Q7Z3D4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 AC026271.2-201ENST00000428091 497 ntBASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD3Q7Z3D4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 AC027612.3-201ENST00000413684 1047 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 371.9 ms