Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 AC004854.2-201ENST00000608450 1441 ntBASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39AQ5SRH9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 AC022517.1-201ENST00000592429 346 ntBASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.19■■□□□ 1.78
TTC39AQ5SRH9 AP004607.4-201ENST00000530158 1459 ntBASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TTC39AQ5SRH9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TTC39AQ5SRH9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 AP006587.3-201ENST00000525742 1516 ntBASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.16■■□□□ 1.78
TTC39AQ5SRH9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 IKBKGP1-201ENST00000612193 1073 ntBASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TTC39AQ5SRH9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
TTC39AQ5SRH9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
TTC39AQ5SRH9 AC233723.2-201ENST00000623798 2106 ntBASIC26.14■■□□□ 1.77
TTC39AQ5SRH9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
TTC39AQ5SRH9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 KRT87P-202ENST00000534226 1464 ntBASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TTC39AQ5SRH9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.12■■□□□ 1.77
TTC39AQ5SRH9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.11■■□□□ 1.77
TTC39AQ5SRH9 AC092053.2-201ENST00000640557 1818 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms