Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM60Q495X7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 AC008694.1-202ENST00000636953 945 ntBASIC23.77■■□□□ 1.4
TRIM60Q495X7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM60Q495X7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM60Q495X7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM60Q495X7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM60Q495X7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM60Q495X7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM60Q495X7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
TRIM60Q495X7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM60Q495X7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM60Q495X7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
TRIM60Q495X7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM60Q495X7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM60Q495X7 AL512625.2-201ENST00000417533 625 ntBASIC23.75■■□□□ 1.39
TRIM60Q495X7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
TRIM60Q495X7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM60Q495X7 AC069236.1-201ENST00000604339 616 ntBASIC23.75■■□□□ 1.39
TRIM60Q495X7 MYC-209ENST00000641252 345 ntBASIC23.75■■□□□ 1.39
TRIM60Q495X7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM60Q495X7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM60Q495X7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM60Q495X7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM60Q495X7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM60Q495X7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 RPS2P4-201ENST00000476944 856 ntBASIC23.74■■□□□ 1.39
TRIM60Q495X7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 AC142381.4-202ENST00000563973 229 ntBASIC23.74■■□□□ 1.39
TRIM60Q495X7 AC006058.3-201ENST00000606217 1069 ntBASIC23.74■■□□□ 1.39
TRIM60Q495X7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM60Q495X7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM60Q495X7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM60Q495X7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM60Q495X7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM60Q495X7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM60Q495X7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM60Q495X7 AC097658.1-201ENST00000475555 843 ntBASIC23.73■■□□□ 1.39
TRIM60Q495X7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM60Q495X7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM60Q495X7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM60Q495X7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
TRIM60Q495X7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.73■■□□□ 1.39
TRIM60Q495X7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM60Q495X7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM60Q495X7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM60Q495X7 AC128676.1-201ENST00000454392 318 ntBASIC23.72■■□□□ 1.39
TRIM60Q495X7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM60Q495X7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM60Q495X7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM60Q495X7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM60Q495X7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM60Q495X7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 AC004812.2-201ENST00000611079 2094 ntBASIC23.71■■□□□ 1.39
TRIM60Q495X7 AP004607.7-201ENST00000527152 1677 ntBASIC23.71■■□□□ 1.39
TRIM60Q495X7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM60Q495X7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM60Q495X7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM60Q495X7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM60Q495X7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM60Q495X7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM60Q495X7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM60Q495X7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM60Q495X7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM60Q495X7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM60Q495X7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM60Q495X7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM60Q495X7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM60Q495X7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.7■■□□□ 1.38
TRIM60Q495X7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 AL139125.2-201ENST00000623134 1869 ntBASIC23.69■■□□□ 1.38
TRIM60Q495X7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms