Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 AC006455.2-201ENST00000429931 906 ntBASIC20.51■□□□□ 0.87
POLR2JP52435 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.51■□□□□ 0.87
POLR2JP52435 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
POLR2JP52435 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
POLR2JP52435 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
POLR2JP52435 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
POLR2JP52435 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 UNC93B8-201ENST00000511903 705 ntBASIC20.5■□□□□ 0.87
POLR2JP52435 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
POLR2JP52435 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
POLR2JP52435 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2JP52435 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
POLR2JP52435 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
POLR2JP52435 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2JP52435 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR2JP52435 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
POLR2JP52435 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2JP52435 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR2JP52435 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
POLR2JP52435 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR2JP52435 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2JP52435 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2JP52435 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2JP52435 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
POLR2JP52435 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.48■□□□□ 0.87
POLR2JP52435 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
POLR2JP52435 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2JP52435 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
POLR2JP52435 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR2JP52435 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR2JP52435 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR2JP52435 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 AC068587.7-201ENST00000641602 218 ntBASIC20.47■□□□□ 0.87
POLR2JP52435 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR2JP52435 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2JP52435 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
POLR2JP52435 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2JP52435 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR2JP52435 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 SLC25A24-204ENST00000569674 2357 ntBASIC20.46■□□□□ 0.87
POLR2JP52435 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
POLR2JP52435 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2JP52435 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms