Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SOX2P48431 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SOX2P48431 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX2P48431 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX2P48431 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SOX2P48431 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
SOX2P48431 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SOX2P48431 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.83■□□□□ 0.61
SOX2P48431 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SOX2P48431 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SOX2P48431 MIR4787-201ENST00000607364 84 ntBASIC18.83■□□□□ 0.6
SOX2P48431 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.83■□□□□ 0.6
SOX2P48431 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SOX2P48431 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX2P48431 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.83■□□□□ 0.6
SOX2P48431 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SOX2P48431 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
SOX2P48431 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SOX2P48431 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SOX2P48431 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.82■□□□□ 0.6
SOX2P48431 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SOX2P48431 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 TSPY9P-201ENST00000440215 945 ntBASIC18.82■□□□□ 0.6
SOX2P48431 TSPY11P-201ENST00000442607 1045 ntBASIC18.82■□□□□ 0.6
SOX2P48431 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 AC010997.5-201ENST00000609182 354 ntBASIC18.82■□□□□ 0.6
SOX2P48431 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.82■□□□□ 0.6
SOX2P48431 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX2P48431 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX2P48431 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX2P48431 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX2P48431 FEM1AP4-201ENST00000443167 1987 ntBASIC18.81■□□□□ 0.6
SOX2P48431 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SOX2P48431 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.81■□□□□ 0.6
SOX2P48431 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX2P48431 AL499627.2-201ENST00000606283 725 ntBASIC18.81■□□□□ 0.6
SOX2P48431 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX2P48431 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SOX2P48431 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SOX2P48431 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SOX2P48431 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX2P48431 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 AC026471.6-201ENST00000622954 1905 ntBASIC18.8■□□□□ 0.6
SOX2P48431 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX2P48431 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SOX2P48431 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX2P48431 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SOX2P48431 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SOX2P48431 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX2P48431 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SOX2P48431 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX2P48431 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.79■□□□□ 0.6
SOX2P48431 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX2P48431 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SOX2P48431 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SOX2P48431 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX2P48431 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms