Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
NCAPD3P42695 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
NCAPD3P42695 MME-217ENST00000616757 1315 ntTSL 5 BASIC38.62■■■■□ 3.77
NCAPD3P42695 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC38.62■■■■□ 3.77
NCAPD3P42695 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
NCAPD3P42695 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
NCAPD3P42695 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC38.61■■■■□ 3.77
NCAPD3P42695 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC38.61■■■■□ 3.77
NCAPD3P42695 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
NCAPD3P42695 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
NCAPD3P42695 AC010980.2-201ENST00000587099 1412 ntBASIC38.61■■■■□ 3.77
NCAPD3P42695 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC38.6■■■■□ 3.77
NCAPD3P42695 FAM210CP-201ENST00000445714 574 ntBASIC38.6■■■■□ 3.77
NCAPD3P42695 UBE2SP1-201ENST00000450587 669 ntBASIC38.6■■■■□ 3.77
NCAPD3P42695 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC38.6■■■■□ 3.77
NCAPD3P42695 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC38.6■■■■□ 3.77
NCAPD3P42695 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC38.6■■■■□ 3.77
NCAPD3P42695 AC073912.3-201ENST00000624414 853 ntBASIC38.6■■■■□ 3.77
NCAPD3P42695 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC38.6■■■■□ 3.77
NCAPD3P42695 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
NCAPD3P42695 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC38.6■■■■□ 3.77
NCAPD3P42695 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC38.6■■■■□ 3.77
NCAPD3P42695 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
NCAPD3P42695 PEX7-202ENST00000367756 680 ntTSL 3 BASIC38.6■■■■□ 3.77
NCAPD3P42695 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC38.6■■■■□ 3.77
NCAPD3P42695 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC38.6■■■■□ 3.77
NCAPD3P42695 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
NCAPD3P42695 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC38.59■■■■□ 3.77
NCAPD3P42695 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
NCAPD3P42695 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC38.59■■■■□ 3.77
NCAPD3P42695 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
NCAPD3P42695 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC38.59■■■■□ 3.77
NCAPD3P42695 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
NCAPD3P42695 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
NCAPD3P42695 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC38.58■■■■□ 3.77
NCAPD3P42695 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC38.58■■■■□ 3.77
NCAPD3P42695 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
NCAPD3P42695 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
NCAPD3P42695 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
NCAPD3P42695 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC38.57■■■■□ 3.76
NCAPD3P42695 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
NCAPD3P42695 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC38.57■■■■□ 3.76
NCAPD3P42695 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
NCAPD3P42695 AC053503.5-201ENST00000601508 636 ntBASIC38.57■■■■□ 3.76
NCAPD3P42695 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
NCAPD3P42695 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC38.56■■■■□ 3.76
NCAPD3P42695 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC38.56■■■■□ 3.76
NCAPD3P42695 AC008403.3-201ENST00000598924 454 ntBASIC38.56■■■■□ 3.76
NCAPD3P42695 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC38.56■■■■□ 3.76
NCAPD3P42695 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC38.55■■■■□ 3.76
NCAPD3P42695 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC38.55■■■■□ 3.76
NCAPD3P42695 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC38.55■■■■□ 3.76
NCAPD3P42695 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 MIR4497-201ENST00000583208 89 ntBASIC38.55■■■■□ 3.76
NCAPD3P42695 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC38.55■■■■□ 3.76
NCAPD3P42695 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
NCAPD3P42695 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
NCAPD3P42695 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
NCAPD3P42695 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC38.54■■■■□ 3.76
NCAPD3P42695 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC38.54■■■■□ 3.76
NCAPD3P42695 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC38.54■■■■□ 3.76
NCAPD3P42695 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC38.54■■■■□ 3.76
NCAPD3P42695 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
NCAPD3P42695 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC38.54■■■■□ 3.76
NCAPD3P42695 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
NCAPD3P42695 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
NCAPD3P42695 MIR1224-201ENST00000408193 85 ntBASIC38.54■■■■□ 3.76
NCAPD3P42695 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC38.54■■■■□ 3.76
NCAPD3P42695 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC38.54■■■■□ 3.76
NCAPD3P42695 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
NCAPD3P42695 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC38.53■■■■□ 3.76
NCAPD3P42695 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
NCAPD3P42695 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC38.53■■■■□ 3.76
NCAPD3P42695 ECEL1P3-201ENST00000427961 737 ntBASIC38.53■■■■□ 3.76
NCAPD3P42695 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC38.53■■■■□ 3.76
NCAPD3P42695 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC38.53■■■■□ 3.76
NCAPD3P42695 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC38.52■■■■□ 3.76
NCAPD3P42695 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
NCAPD3P42695 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
NCAPD3P42695 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
NCAPD3P42695 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC38.52■■■■□ 3.76
NCAPD3P42695 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
NCAPD3P42695 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
NCAPD3P42695 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
NCAPD3P42695 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC38.51■■■■□ 3.76
NCAPD3P42695 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
NCAPD3P42695 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
NCAPD3P42695 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
NCAPD3P42695 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
NCAPD3P42695 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC38.5■■■■□ 3.75
NCAPD3P42695 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC38.5■■■■□ 3.75
NCAPD3P42695 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC38.5■■■■□ 3.75
NCAPD3P42695 CBFB-203ENST00000561924 584 ntTSL 5 BASIC38.5■■■■□ 3.75
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms