Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AC005703.6-201ENST00000623265 1329 ntBASIC20.52■□□□□ 0.87
HTR1EP28566 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HTR1EP28566 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTR1EP28566 MIR6821-201ENST00000617625 74 ntBASIC20.51■□□□□ 0.87
HTR1EP28566 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTR1EP28566 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR1EP28566 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.51■□□□□ 0.87
HTR1EP28566 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR1EP28566 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR1EP28566 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.51■□□□□ 0.87
HTR1EP28566 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.5■□□□□ 0.87
HTR1EP28566 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.5■□□□□ 0.87
HTR1EP28566 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR1EP28566 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR1EP28566 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
HTR1EP28566 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HTR1EP28566 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
HTR1EP28566 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR1EP28566 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.49■□□□□ 0.87
HTR1EP28566 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HTR1EP28566 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR1EP28566 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 DUX4L19-201ENST00000557448 1267 ntBASIC20.49■□□□□ 0.87
HTR1EP28566 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR1EP28566 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR1EP28566 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HTR1EP28566 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR1EP28566 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HTR1EP28566 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 Z98882.1-201ENST00000622160 2253 ntBASIC20.48■□□□□ 0.87
HTR1EP28566 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR1EP28566 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HTR1EP28566 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HTR1EP28566 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HTR1EP28566 MIR939-201ENST00000401314 82 ntBASIC20.48■□□□□ 0.87
HTR1EP28566 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.48■□□□□ 0.87
HTR1EP28566 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HTR1EP28566 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.48■□□□□ 0.87
HTR1EP28566 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.48■□□□□ 0.87
HTR1EP28566 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.48■□□□□ 0.87
HTR1EP28566 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
HTR1EP28566 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 AC097381.1-201ENST00000429019 1296 ntBASIC20.47■□□□□ 0.87
HTR1EP28566 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HTR1EP28566 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.47■□□□□ 0.87
HTR1EP28566 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.47■□□□□ 0.87
HTR1EP28566 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR1EP28566 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HTR1EP28566 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.46■□□□□ 0.87
HTR1EP28566 AC004687.1-201ENST00000579003 1625 ntBASIC20.46■□□□□ 0.87
HTR1EP28566 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 AC091305.1-201ENST00000479476 895 ntBASIC20.46■□□□□ 0.87
HTR1EP28566 AP001330.3-201ENST00000520123 633 ntBASIC20.46■□□□□ 0.87
HTR1EP28566 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.46■□□□□ 0.87
HTR1EP28566 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.46■□□□□ 0.87
HTR1EP28566 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HTR1EP28566 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR1EP28566 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
HTR1EP28566 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.45■□□□□ 0.87
HTR1EP28566 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
HTR1EP28566 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
HTR1EP28566 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.45■□□□□ 0.86
HTR1EP28566 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.45■□□□□ 0.86
HTR1EP28566 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.45■□□□□ 0.86
HTR1EP28566 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR1EP28566 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.45■□□□□ 0.86
HTR1EP28566 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms