Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRAP04437 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRAP04437 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRAP04437 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TCRAP04437 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRAP04437 AC103834.1-201ENST00000520383 144 ntBASIC16.31■□□□□ 0.2
TCRAP04437 AC103724.3-201ENST00000564481 992 ntBASIC16.31■□□□□ 0.2
TCRAP04437 AC104564.3-201ENST00000582367 638 ntBASIC16.31■□□□□ 0.2
TCRAP04437 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TCRAP04437 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TCRAP04437 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
TCRAP04437 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRAP04437 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.31■□□□□ 0.2
TCRAP04437 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRAP04437 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRAP04437 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRAP04437 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TCRAP04437 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TCRAP04437 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 YBX1P4-201ENST00000392794 808 ntBASIC16.3■□□□□ 0.2
TCRAP04437 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TCRAP04437 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.3■□□□□ 0.2
TCRAP04437 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRAP04437 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRAP04437 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.3■□□□□ 0.2
TCRAP04437 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
TCRAP04437 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRAP04437 AC021242.3-201ENST00000607598 1377 ntBASIC16.29■□□□□ 0.2
TCRAP04437 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TCRAP04437 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRAP04437 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.29■□□□□ 0.2
TCRAP04437 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TCRAP04437 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TCRAP04437 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 C17orf82-201ENST00000623772 1530 ntBASIC16.29■□□□□ 0.2
TCRAP04437 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TCRAP04437 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TCRAP04437 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TCRAP04437 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TCRAP04437 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRAP04437 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TCRAP04437 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRAP04437 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TCRAP04437 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRAP04437 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.28■□□□□ 0.2
TCRAP04437 AC026471.6-201ENST00000622954 1905 ntBASIC16.27■□□□□ 0.2
TCRAP04437 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRAP04437 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRAP04437 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TCRAP04437 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TCRAP04437 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
TCRAP04437 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.27■□□□□ 0.2
TCRAP04437 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRAP04437 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TCRAP04437 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TCRAP04437 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TCRAP04437 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.27■□□□□ 0.19
TCRAP04437 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.27■□□□□ 0.19
TCRAP04437 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRAP04437 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TCRAP04437 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.27■□□□□ 0.19
TCRAP04437 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRAP04437 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TCRAP04437 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TCRAP04437 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TCRAP04437 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRAP04437 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRAP04437 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms