Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
APOC1P02654 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.9■□□□□ 0.62
APOC1P02654 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC1P02654 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
APOC1P02654 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
APOC1P02654 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
APOC1P02654 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.89■□□□□ 0.61
APOC1P02654 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
APOC1P02654 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
APOC1P02654 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.89■□□□□ 0.61
APOC1P02654 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
APOC1P02654 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOC1P02654 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.88■□□□□ 0.61
APOC1P02654 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
APOC1P02654 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.88■□□□□ 0.61
APOC1P02654 AC011298.3-201ENST00000615796 283 ntBASIC18.88■□□□□ 0.61
APOC1P02654 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 OR7E47P-201ENST00000546390 1422 ntBASIC18.88■□□□□ 0.61
APOC1P02654 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOC1P02654 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.88■□□□□ 0.61
APOC1P02654 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOC1P02654 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
APOC1P02654 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOC1P02654 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
APOC1P02654 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.87■□□□□ 0.61
APOC1P02654 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.87■□□□□ 0.61
APOC1P02654 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.87■□□□□ 0.61
APOC1P02654 AC010141.3-201ENST00000456659 717 ntBASIC18.87■□□□□ 0.61
APOC1P02654 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.87■□□□□ 0.61
APOC1P02654 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.87■□□□□ 0.61
APOC1P02654 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC1P02654 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOC1P02654 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC1P02654 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOC1P02654 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
APOC1P02654 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.86■□□□□ 0.61
APOC1P02654 AC136469.2-201ENST00000623944 1028 ntBASIC18.86■□□□□ 0.61
APOC1P02654 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.86■□□□□ 0.61
APOC1P02654 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC1P02654 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.86■□□□□ 0.61
APOC1P02654 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC1P02654 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC1P02654 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC1P02654 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
APOC1P02654 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.85■□□□□ 0.61
APOC1P02654 MIR4466-201ENST00000606121 54 ntBASIC18.85■□□□□ 0.61
APOC1P02654 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
APOC1P02654 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.85■□□□□ 0.61
APOC1P02654 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOC1P02654 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOC1P02654 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
APOC1P02654 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.85■□□□□ 0.61
APOC1P02654 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOC1P02654 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
APOC1P02654 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.84■□□□□ 0.61
APOC1P02654 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
APOC1P02654 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
APOC1P02654 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
APOC1P02654 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.84■□□□□ 0.61
APOC1P02654 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 SERBP1P1-201ENST00000396021 1160 ntBASIC18.84■□□□□ 0.61
APOC1P02654 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC1P02654 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
APOC1P02654 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms