Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CD4P01730 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CD4P01730 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CD4P01730 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD4P01730 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CD4P01730 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.82■■□□□ 1.4
CD4P01730 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD4P01730 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CD4P01730 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD4P01730 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.82■■□□□ 1.4
CD4P01730 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.82■■□□□ 1.4
CD4P01730 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.82■■□□□ 1.4
CD4P01730 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CD4P01730 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
CD4P01730 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.81■■□□□ 1.4
CD4P01730 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD4P01730 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.81■■□□□ 1.4
CD4P01730 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CD4P01730 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.8■■□□□ 1.4
CD4P01730 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CD4P01730 POU5F1P3-201ENST00000428824 1078 ntBASIC23.8■■□□□ 1.4
CD4P01730 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CD4P01730 AC093827.2-201ENST00000512654 315 ntBASIC23.8■■□□□ 1.4
CD4P01730 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.8■■□□□ 1.4
CD4P01730 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
CD4P01730 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.8■■□□□ 1.4
CD4P01730 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD4P01730 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.79■■□□□ 1.4
CD4P01730 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CD4P01730 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CD4P01730 ITM2C-210ENST00000620962 501 ntBASIC23.79■■□□□ 1.4
CD4P01730 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD4P01730 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
CD4P01730 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.78■■□□□ 1.4
CD4P01730 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 MIR4758-201ENST00000577688 71 ntBASIC23.78■■□□□ 1.4
CD4P01730 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.78■■□□□ 1.4
CD4P01730 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.78■■□□□ 1.4
CD4P01730 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.78■■□□□ 1.4
CD4P01730 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD4P01730 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD4P01730 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD4P01730 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.77■■□□□ 1.4
CD4P01730 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.77■■□□□ 1.4
CD4P01730 SLC7A5P1-201ENST00000568957 537 ntBASIC23.77■■□□□ 1.4
CD4P01730 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.77■■□□□ 1.4
CD4P01730 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.77■■□□□ 1.4
CD4P01730 AC013268.1-206ENST00000638368 961 ntBASIC23.77■■□□□ 1.4
CD4P01730 AC112229.1-201ENST00000639295 961 ntBASIC23.77■■□□□ 1.4
CD4P01730 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD4P01730 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CD4P01730 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD4P01730 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD4P01730 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CD4P01730 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD4P01730 AC068338.2-201ENST00000563278 1430 ntBASIC23.76■■□□□ 1.39
CD4P01730 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD4P01730 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD4P01730 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CD4P01730 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.76■■□□□ 1.39
CD4P01730 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD4P01730 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.76■■□□□ 1.39
CD4P01730 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.76■■□□□ 1.39
CD4P01730 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CD4P01730 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CD4P01730 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD4P01730 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms