Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 ATP5G2P3-201ENST00000429083 425 ntBASIC21.93■■□□□ 1.1
SMIM23A6NLE4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 NTF6A-201ENST00000591175 560 ntBASIC21.93■■□□□ 1.1
SMIM23A6NLE4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM23A6NLE4 AC074183.2-201ENST00000623112 922 ntBASIC21.93■■□□□ 1.1
SMIM23A6NLE4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM23A6NLE4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.91■■□□□ 1.1
SMIM23A6NLE4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMIM23A6NLE4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SMIM23A6NLE4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMIM23A6NLE4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.89■■□□□ 1.1
SMIM23A6NLE4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM23A6NLE4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SMIM23A6NLE4 AC092667.1-201ENST00000434301 2586 ntBASIC21.89■■□□□ 1.09
SMIM23A6NLE4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM23A6NLE4 ABHD17AP5-201ENST00000580133 923 ntBASIC21.89■■□□□ 1.09
SMIM23A6NLE4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.89■■□□□ 1.09
SMIM23A6NLE4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM23A6NLE4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMIM23A6NLE4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 AC026471.6-201ENST00000622954 1905 ntBASIC21.87■■□□□ 1.09
SMIM23A6NLE4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SMIM23A6NLE4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMIM23A6NLE4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms