Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 AL358852.1-201ENST00000623174 1268 ntBASIC20.47■□□□□ 0.87
LRIT2A6NDA9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT2A6NDA9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 LINC00565-201ENST00000562710 2331 ntBASIC20.46■□□□□ 0.87
LRIT2A6NDA9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 BX005040.4-201ENST00000637145 1518 ntBASIC20.46■□□□□ 0.87
LRIT2A6NDA9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT2A6NDA9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 ZNRF2P3-201ENST00000424200 374 ntBASIC20.45■□□□□ 0.86
LRIT2A6NDA9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT2A6NDA9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT2A6NDA9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 AC026471.6-201ENST00000622954 1905 ntBASIC20.43■□□□□ 0.86
LRIT2A6NDA9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT2A6NDA9 AC009237.3-201ENST00000393279 1427 ntBASIC20.43■□□□□ 0.86
LRIT2A6NDA9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT2A6NDA9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT2A6NDA9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms