Protein–RNA interactions for Protein: A0A140TA62

LOC100653049, Uncharacterized protein, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100653049A0A140TA62 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 ATP5G2P3-201ENST00000429083 425 ntBASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 LINC01006-201ENST00000333319 2292 ntBASIC20.77■□□□□ 0.92
LOC100653049A0A140TA62 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LOC100653049A0A140TA62 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 HSD17B1P1-201ENST00000590052 955 ntBASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 NTF6A-201ENST00000591175 560 ntBASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LOC100653049A0A140TA62 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LOC100653049A0A140TA62 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 MIR6722-201ENST00000617286 78 ntBASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LOC100653049A0A140TA62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.73■□□□□ 0.91
LOC100653049A0A140TA62 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LOC100653049A0A140TA62 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 MIR4508-201ENST00000584178 70 ntBASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC100653049A0A140TA62 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LOC100653049A0A140TA62 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LOC100653049A0A140TA62 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LOC100653049A0A140TA62 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LOC100653049A0A140TA62 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LOC100653049A0A140TA62 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms