Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 AC005229.4-201ENST00000610085 2198 ntBASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV13-1A0A0B4J241 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 HCG11-201ENST00000411553 5696 ntBASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV13-1A0A0B4J241 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 BX664725.1-201ENST00000438252 379 ntBASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV13-1A0A0B4J241 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV13-1A0A0B4J241 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 AC244015.2-201ENST00000616358 1861 ntBASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV13-1A0A0B4J241 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV13-1A0A0B4J241 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms