Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 AC239859.2-201ENST00000444165 318 ntBASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV9-2A0A087WT02 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 AC090877.2-201ENST00000558441 1738 ntBASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 AC137630.3-201ENST00000607245 391 ntBASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV9-2A0A087WT02 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV9-2A0A087WT02 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 MIR4281-201ENST00000580852 62 ntBASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV9-2A0A087WT02 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 LINC01006-201ENST00000333319 2292 ntBASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-2A0A087WT02 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-2A0A087WT02 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-2A0A087WT02 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV9-2A0A087WT02 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms