Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SYT6-210ENST00000641643 1587 ntBASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 AC087239.1-201ENST00000622671 572 ntBASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV27A0A087WT01 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV27A0A087WT01 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 Z98882.1-201ENST00000622160 2253 ntBASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 AC010141.3-201ENST00000456659 717 ntBASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRAV27A0A087WT01 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 AC131281.2-201ENST00000520478 145 ntBASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV27A0A087WT01 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV27A0A087WT01 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.39■□□□□ 0.7
TRAV27A0A087WT01 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TRAV27A0A087WT01 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TRAV27A0A087WT01 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 DUX4L19-201ENST00000557448 1267 ntBASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 AL138724.1-201ENST00000606771 1088 ntBASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV27A0A087WT01 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV27A0A087WT01 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms