Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV25-1A0A075B6N4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 FP325331.1-202ENST00000623531 1380 ntBASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV25-1A0A075B6N4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV25-1A0A075B6N4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 AC009086.3-201ENST00000623486 1008 ntBASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV25-1A0A075B6N4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV25-1A0A075B6N4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 MTDHP2-201ENST00000601468 714 ntBASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 AC010542.4-201ENST00000563151 1910 ntBASIC15.37■□□□□ 0.05
TRBV25-1A0A075B6N4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 Z92544.1-202ENST00000571933 1220 ntBASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 AC092028.1-203ENST00000608262 953 ntBASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms