Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC12.44□□□□□ -0.42
SLC1A1P43005 AC073254.1-213ENST00000596622 704 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 AC073254.1-211ENST00000598700 761 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 AC036214.2-201ENST00000606512 917 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 AL031775.2-201ENST00000606921 405 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 AC013564.1-201ENST00000612806 707 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SLC1A1P43005 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC12.44□□□□□ -0.42
SLC1A1P43005 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 AC073264.4-201ENST00000638055 623 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 MOV10-203ENST00000369645 3552 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 PRAMEF6-201ENST00000376189 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 PRAMEF6-202ENST00000415464 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 CARD8-215ENST00000520015 1931 ntTSL 2 BASIC12.44□□□□□ -0.42
SLC1A1P43005 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC12.44□□□□□ -0.42
SLC1A1P43005 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 CSPG4P12-201ENST00000558282 4853 ntBASIC12.44□□□□□ -0.42
SLC1A1P43005 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC12.44□□□□□ -0.42
SLC1A1P43005 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SLC1A1P43005 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 RAP1GAP-206ENST00000374765 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 AL590552.1-201ENST00000623164 1770 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC12.43□□□□□ -0.42
SLC1A1P43005 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
SLC1A1P43005 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC12.43□□□□□ -0.42
SLC1A1P43005 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 AC008659.1-201ENST00000501834 1458 ntTSL 3 BASIC12.43□□□□□ -0.42
SLC1A1P43005 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 TBC1D3P3-201ENST00000342824 1080 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 MIR611-201ENST00000384869 67 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 COX7CP1-201ENST00000446556 192 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 RN7SL304P-201ENST00000488028 301 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SLC1A1P43005 ABCD1P3-201ENST00000562927 605 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 AC018846.1-201ENST00000568231 183 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 AP001793.1-201ENST00000584733 839 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SLC1A1P43005 AC091736.1-201ENST00000609370 305 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 LINC02255-201ENST00000619758 199 ntTSL 5 BASIC12.43□□□□□ -0.42
SLC1A1P43005 AC005865.2-202ENST00000635814 725 ntBASIC12.43□□□□□ -0.42
SLC1A1P43005 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC12.43□□□□□ -0.42
SLC1A1P43005 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 ZNF550-205ENST00000457177 3376 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 ADGRF3-201ENST00000311519 3240 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 ARMC2-203ENST00000392644 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC12.43□□□□□ -0.42
SLC1A1P43005 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SLC1A1P43005 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC12.43□□□□□ -0.42
SLC1A1P43005 AC009779.3-202ENST00000550412 3382 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SLC1A1P43005 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 CHP1-201ENST00000334660 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 DFNB59-202ENST00000409117 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 LINC02170-202ENST00000562231 2218 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 SLC4A9-204ENST00000506757 3277 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 KRT25-201ENST00000312150 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 KCNJ15-206ENST00000398932 2747 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 ETV1-204ENST00000403685 1603 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 TCP1P1-201ENST00000412860 1610 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 OR2B11-201ENST00000318749 1054 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SLC1A1P43005 OR7E12P-201ENST00000344740 973 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SLC1A1P43005 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC005102.1-201ENST00000403118 479 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 FTH1P18-201ENST00000412071 549 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC12.42□□□□□ -0.42
SLC1A1P43005 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC12.42□□□□□ -0.42
SLC1A1P43005 AC007679.1-201ENST00000458609 502 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 SNRPD2P2-201ENST00000473818 333 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 AC092910.2-201ENST00000491262 348 ntBASIC12.42□□□□□ -0.42
SLC1A1P43005 ST3GAL1P1-201ENST00000513810 1014 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms