RNA–Protein interactions for RNA: ENST00000562231.5

LINC02170-202, humanhuman

TSL 2 BASIC

Gene LINC02170, Length 2,218 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02170-202ENST00000562231 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
LINC02170-202ENST00000562231 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
LINC02170-202ENST00000562231 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
LINC02170-202ENST00000562231 SHROOM4Q9ULL8 1493 aa19.74■□□□□ 0.75
LINC02170-202ENST00000562231 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
LINC02170-202ENST00000562231 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
LINC02170-202ENST00000562231 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
LINC02170-202ENST00000562231 HRCP23327 699 aa19.34■□□□□ 0.69
LINC02170-202ENST00000562231 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
LINC02170-202ENST00000562231 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
LINC02170-202ENST00000562231 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
LINC02170-202ENST00000562231 ABCC9O60706 1549 aa18.86■□□□□ 0.61
LINC02170-202ENST00000562231 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
LINC02170-202ENST00000562231 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
LINC02170-202ENST00000562231 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
LINC02170-202ENST00000562231 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
LINC02170-202ENST00000562231 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.57
LINC02170-202ENST00000562231 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
LINC02170-202ENST00000562231 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
LINC02170-202ENST00000562231 MYT1Q01538 1121 aa18.42■□□□□ 0.54
LINC02170-202ENST00000562231 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
LINC02170-202ENST00000562231 TRIM41Q8WV44 630 aa18.34■□□□□ 0.53
LINC02170-202ENST00000562231 NACADO15069 1562 aa18.32■□□□□ 0.52
LINC02170-202ENST00000562231 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
LINC02170-202ENST00000562231 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
LINC02170-202ENST00000562231 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
LINC02170-202ENST00000562231 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
LINC02170-202ENST00000562231 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
LINC02170-202ENST00000562231 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
LINC02170-202ENST00000562231 WIZO95785 1651 aa18.02■□□□□ 0.48
LINC02170-202ENST00000562231 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
LINC02170-202ENST00000562231 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
LINC02170-202ENST00000562231 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
LINC02170-202ENST00000562231 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
LINC02170-202ENST00000562231 EEA1Q15075 1411 aa17.84■□□□□ 0.45
LINC02170-202ENST00000562231 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
LINC02170-202ENST00000562231 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.44
LINC02170-202ENST00000562231 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
LINC02170-202ENST00000562231 PRKCSHP14314 528 aaPredicted RBP17.75■□□□□ 0.43
LINC02170-202ENST00000562231 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
LINC02170-202ENST00000562231 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
LINC02170-202ENST00000562231 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
LINC02170-202ENST00000562231 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
LINC02170-202ENST00000562231 CEP162Q5TB80 1403 aa17.71■□□□□ 0.43
LINC02170-202ENST00000562231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
LINC02170-202ENST00000562231 APLP2Q06481 763 aa17.66■□□□□ 0.42
LINC02170-202ENST00000562231 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
LINC02170-202ENST00000562231 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
LINC02170-202ENST00000562231 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
LINC02170-202ENST00000562231 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
LINC02170-202ENST00000562231 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
LINC02170-202ENST00000562231 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.4
LINC02170-202ENST00000562231 SOGA1O94964 1423 aa17.56■□□□□ 0.4
LINC02170-202ENST00000562231 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
LINC02170-202ENST00000562231 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
LINC02170-202ENST00000562231 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
LINC02170-202ENST00000562231 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
LINC02170-202ENST00000562231 KIF21BO75037 1637 aa17.53■□□□□ 0.4
LINC02170-202ENST00000562231 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
LINC02170-202ENST00000562231 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
LINC02170-202ENST00000562231 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
LINC02170-202ENST00000562231 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
LINC02170-202ENST00000562231 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
LINC02170-202ENST00000562231 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
LINC02170-202ENST00000562231 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
LINC02170-202ENST00000562231 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
LINC02170-202ENST00000562231 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
LINC02170-202ENST00000562231 CLIP1P30622 1438 aa17.32■□□□□ 0.36
LINC02170-202ENST00000562231 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
LINC02170-202ENST00000562231 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
LINC02170-202ENST00000562231 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
LINC02170-202ENST00000562231 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
LINC02170-202ENST00000562231 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
LINC02170-202ENST00000562231 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
LINC02170-202ENST00000562231 MIER1Q8N108 512 aa17.12■□□□□ 0.33
LINC02170-202ENST00000562231 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
LINC02170-202ENST00000562231 CUX2O14529 1486 aa17.09■□□□□ 0.33
LINC02170-202ENST00000562231 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
LINC02170-202ENST00000562231 RRBP1Q9P2E9 1410 aaKnown RBP17.05■□□□□ 0.32
LINC02170-202ENST00000562231 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
LINC02170-202ENST00000562231 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
LINC02170-202ENST00000562231 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
LINC02170-202ENST00000562231 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC02170-202ENST00000562231 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
LINC02170-202ENST00000562231 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
LINC02170-202ENST00000562231 KIF27Q86VH2 1401 aa16.92■□□□□ 0.3
LINC02170-202ENST00000562231 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
LINC02170-202ENST00000562231 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
LINC02170-202ENST00000562231 CUX1P39880 1505 aa16.88■□□□□ 0.29
LINC02170-202ENST00000562231 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
LINC02170-202ENST00000562231 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
LINC02170-202ENST00000562231 CFTRP13569 1480 aa16.83■□□□□ 0.28
LINC02170-202ENST00000562231 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
LINC02170-202ENST00000562231 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
LINC02170-202ENST00000562231 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
LINC02170-202ENST00000562231 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
LINC02170-202ENST00000562231 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
LINC02170-202ENST00000562231 TIMELESSQ9UNS1 1208 aa16.74■□□□□ 0.27
LINC02170-202ENST00000562231 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
LINC02170-202ENST00000562231 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms