Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC9.36□□□□□ -0.914e-6■■■■■ 34.5
SF3B1O75533 ZNF611-220ENST00000640952 577 ntTSL 49.28□□□□□ -0.924e-7■■■■■ 34.5
SF3B1O75533 METTL17-209ENST00000554588 1077 ntTSL 29.22□□□□□ -0.934e-6■■■■■ 34.5
SF3B1O75533 ARHGEF12-205ENST00000526067 1323 ntTSL 39.19□□□□□ -0.944e-8■■■■■ 34.5
SF3B1O75533 METTL17-207ENST00000554283 568 ntTSL 49.19□□□□□ -0.944e-6■■■■■ 34.5
SF3B1O75533 METTL17-213ENST00000554985 596 ntTSL 29.19□□□□□ -0.944e-6■■■■■ 34.5
SF3B1O75533 METTL17-214ENST00000555177 572 ntTSL 29.19□□□□□ -0.944e-6■■■■■ 34.5
SF3B1O75533 METTL17-220ENST00000556442 582 ntTSL 29.19□□□□□ -0.944e-6■■■■■ 34.5
SF3B1O75533 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC9.15□□□□□ -0.944e-7■■■■■ 34.5
SF3B1O75533 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC9.14□□□□□ -0.954e-6■■■■■ 34.5
SF3B1O75533 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.1□□□□□ -0.954e-7■■■■■ 34.5
SF3B1O75533 GNAS-242ENST00000483387 593 ntTSL 29.06□□□□□ -0.964e-6■■■■■ 34.5
SF3B1O75533 GOSR2-204ENST00000570879 710 ntTSL 59.06□□□□□ -0.964e-7■■■■■ 34.5
SF3B1O75533 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)9□□□□□ -0.974e-7■■■■■ 34.5
SF3B1O75533 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC8.92□□□□□ -0.984e-7■■■■■ 34.5
SF3B1O75533 PPP4R1-212ENST00000579415 563 ntTSL 48.91□□□□□ -0.984e-6■■■■■ 34.5
SF3B1O75533 PPP4R1-211ENST00000578875 580 ntTSL 48.87□□□□□ -0.994e-6■■■■■ 34.5
SF3B1O75533 LINC00958-206ENST00000532541 1124 ntTSL 38.83□□□□□ -14e-8■■■■■ 34.5
SF3B1O75533 LINC00958-207ENST00000534477 888 ntTSL 38.83□□□□□ -14e-8■■■■■ 34.5
SF3B1O75533 TANK-221ENST00000483622 566 ntTSL 58.69□□□□□ -1.024e-6■■■■■ 34.5
SF3B1O75533 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.67□□□□□ -1.024e-7■■■■■ 34.5
SF3B1O75533 IFRD1-207ENST00000440625 891 ntTSL 48.64□□□□□ -1.034e-8■■■■■ 34.5
SF3B1O75533 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.64□□□□□ -1.034e-8■■■■■ 34.5
SF3B1O75533 HAT1-203ENST00000412731 1567 ntTSL 1 (best)8.62□□□□□ -1.034e-6■■■■■ 34.5
SF3B1O75533 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.034e-7■■■■■ 34.5
SF3B1O75533 KDM5C-210ENST00000467093 446 ntTSL 38.6□□□□□ -1.034e-6■■■■■ 34.5
SF3B1O75533 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.56□□□□□ -1.044e-7■■■■■ 34.5
SF3B1O75533 ERF-205ENST00000595941 227 ntTSL 48.5□□□□□ -1.054e-7■■■■■ 34.5
SF3B1O75533 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.49□□□□□ -1.054e-7■■■■■ 34.5
SF3B1O75533 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.46□□□□□ -1.064e-7■■■■■ 34.5
SF3B1O75533 ZBTB38-223ENST00000637706 3209 ntTSL 58.4□□□□□ -1.064e-6■■■■■ 34.5
SF3B1O75533 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.074e-6■■■■■ 34.5
SF3B1O75533 ZNF611-205ENST00000595001 4796 ntTSL 1 (best)8.35□□□□□ -1.074e-7■■■■■ 34.5
SF3B1O75533 ANLN-204ENST00000424865 596 ntTSL 38.28□□□□□ -1.084e-7■■■■■ 34.5
SF3B1O75533 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.26□□□□□ -1.094e-6■■■■■ 34.5
SF3B1O75533 ZBTB38-206ENST00000507657 3419 ntTSL 1 (best)8.14□□□□□ -1.114e-6■■■■■ 34.5
SF3B1O75533 TTC3-218ENST00000484047 1945 ntTSL 28.11□□□□□ -1.112e-7■■■■■ 34.5
SF3B1O75533 METTL17-212ENST00000554949 576 ntTSL 38.08□□□□□ -1.124e-6■■■■■ 34.5
SF3B1O75533 METTL17-218ENST00000555670 803 ntTSL 58.08□□□□□ -1.124e-6■■■■■ 34.5
SF3B1O75533 METTL17-206ENST00000553564 900 ntTSL 58.07□□□□□ -1.124e-6■■■■■ 34.5
SF3B1O75533 GOSR2-224ENST00000639080 758 ntTSL 27.98□□□□□ -1.134e-7■■■■■ 34.5
SF3B1O75533 PSMB4-203ENST00000474100 755 ntTSL 57.97□□□□□ -1.134e-9■■■■■ 34.5
SF3B1O75533 PRMT5-220ENST00000556032 643 ntTSL 57.94□□□□□ -1.144e-7■■■■■ 34.5
SF3B1O75533 MAN2A2-225ENST00000560880 718 ntTSL 27.92□□□□□ -1.144e-7■■■■■ 34.5
SF3B1O75533 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.9□□□□□ -1.144e-6■■■■■ 34.5
SF3B1O75533 UBP1-213ENST00000496310 544 ntTSL 47.9□□□□□ -1.144e-6■■■■■ 34.5
SF3B1O75533 PPP3CB-205ENST00000430762 608 ntTSL 37.87□□□□□ -1.154e-9■■■■■ 34.5
SF3B1O75533 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.87□□□□□ -1.154e-6■■■■■ 34.5
SF3B1O75533 ZNF611-215ENST00000601249 2546 ntTSL 1 (best)7.83□□□□□ -1.164e-7■■■■■ 34.5
SF3B1O75533 TANK-212ENST00000440506 550 ntTSL 37.76□□□□□ -1.174e-6■■■■■ 34.5
SF3B1O75533 RPL29-207ENST00000486565 574 ntTSL 1 (best)7.76□□□□□ -1.176e-16■■■■■ 34.5
SF3B1O75533 PPP4R1-226ENST00000583903 549 ntTSL 47.75□□□□□ -1.174e-6■■■■■ 34.5
SF3B1O75533 MAN2A2-207ENST00000558374 731 ntTSL 37.73□□□□□ -1.174e-7■■■■■ 34.5
SF3B1O75533 MAN2A2-208ENST00000558538 576 ntTSL 47.73□□□□□ -1.174e-7■■■■■ 34.5
SF3B1O75533 PRMT5-223ENST00000556616 571 ntTSL 47.63□□□□□ -1.194e-7■■■■■ 34.5
SF3B1O75533 SETD5-202ENST00000399686 3362 ntTSL 57.57□□□□□ -1.24e-7■■■■■ 34.5
SF3B1O75533 PPP3CB-206ENST00000495897 1144 ntTSL 27.48□□□□□ -1.214e-9■■■■■ 34.5
SF3B1O75533 VPS13A-201ENST00000355766 753 ntTSL 37.36□□□□□ -1.234e-7■■■■■ 34.5
SF3B1O75533 GGA1-209ENST00000423024 559 ntTSL 37.33□□□□□ -1.244e-6■■■■■ 34.5
SF3B1O75533 GGA1-208ENST00000413251 565 ntTSL 57.31□□□□□ -1.244e-6■■■■■ 34.5
SF3B1O75533 CHPT1-203ENST00000546873 624 ntTSL 37.25□□□□□ -1.254e-6■■■■■ 34.5
SF3B1O75533 GBE1-203ENST00000484687 863 ntTSL 27.11□□□□□ -1.274e-7■■■■■ 34.5
SF3B1O75533 SPTA1-205ENST00000481212 643 ntTSL 37.07□□□□□ -1.284e-7■■■■■ 34.5
SF3B1O75533 ZNF611-212ENST00000598723 565 ntTSL 47.04□□□□□ -1.284e-7■■■■■ 34.5
SF3B1O75533 GABPB1-AS1-203ENST00000558593 507 ntTSL 57.01□□□□□ -1.294e-7■■■■■ 34.5
SF3B1O75533 PPP4R1-216ENST00000580283 378 ntTSL 26.96□□□□□ -1.34e-6■■■■■ 34.5
SF3B1O75533 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.314e-6■■■■■ 34.5
SF3B1O75533 PTCD3-215ENST00000484203 928 ntTSL 26.76□□□□□ -1.334e-6■■■■■ 34.5
SF3B1O75533 LINC00958-204ENST00000529328 580 ntTSL 36.75□□□□□ -1.334e-8■■■■■ 34.5
SF3B1O75533 ENPP3-206ENST00000470930 550 ntTSL 56.74□□□□□ -1.334e-6■■■■■ 34.5
SF3B1O75533 UBAP2-208ENST00000459988 2628 ntTSL 26.7□□□□□ -1.344e-6■■■■■ 34.5
SF3B1O75533 SAT1-206ENST00000463236 735 ntTSL 36.69□□□□□ -1.344e-9■■■■■ 34.5
SF3B1O75533 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.31□□□□□ -1.44e-6■■■■■ 34.5
SF3B1O75533 SPEN-202ENST00000438066 1733 ntTSL 36.18□□□□□ -1.424e-6■■■■■ 34.5
SF3B1O75533 SNRPA1-209ENST00000560307 433 ntTSL 26.16□□□□□ -1.424e-7■■■■■ 34.5
SF3B1O75533 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.12□□□□□ -1.434e-8■■■■■ 34.5
SF3B1O75533 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.434e-6■■■■■ 34.5
SF3B1O75533 PDCD6IP-211ENST00000482561 626 ntTSL 56.06□□□□□ -1.444e-8■■■■■ 34.5
SF3B1O75533 MTMR1-206ENST00000438018 397 ntTSL 55.91□□□□□ -1.464e-6■■■■■ 34.5
SF3B1O75533 ERBIN-207ENST00000505822 367 ntTSL 25.91□□□□□ -1.464e-6■■■■■ 34.5
SF3B1O75533 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.74□□□□□ -1.494e-7■■■■■ 34.5
SF3B1O75533 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.74□□□□□ -1.494e-8■■■■■ 34.5
SF3B1O75533 CELF1-211ENST00000528434 543 ntTSL 55.69□□□□□ -1.54e-7■■■■■ 34.5
SF3B1O75533 ENPP3-204ENST00000423831 598 ntTSL 35.68□□□□□ -1.54e-6■■■■■ 34.5
SF3B1O75533 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.514e-7■■■■■ 34.5
SF3B1O75533 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.58□□□□□ -1.524e-6■■■■■ 34.5
SF3B1O75533 CELF1-209ENST00000526277 556 ntTSL 45.49□□□□□ -1.534e-7■■■■■ 34.5
SF3B1O75533 PTCD3-213ENST00000480102 589 ntTSL 45.33□□□□□ -1.564e-6■■■■■ 34.5
SF3B1O75533 CSE1L-203ENST00000469700 1401 ntTSL 1 (best)5.29□□□□□ -1.564e-6■■■■■ 34.5
SF3B1O75533 ST13-202ENST00000411695 549 ntTSL 55.28□□□□□ -1.564e-6■■■■■ 34.5
SF3B1O75533 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.574e-9■■■■■ 34.5
SF3B1O75533 SPEN-203ENST00000442985 891 ntTSL 55.23□□□□□ -1.574e-6■■■■■ 34.5
SF3B1O75533 ARPC3-202ENST00000426440 349 ntTSL 35.21□□□□□ -1.584e-7■■■■■ 34.5
SF3B1O75533 LINC00958-205ENST00000531402 590 ntTSL 45.19□□□□□ -1.584e-8■■■■■ 34.5
SF3B1O75533 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.64e-9■■■■■ 34.5
SF3B1O75533 TXNIP-202ENST00000486597 509 ntTSL 25.01□□□□□ -1.619e-22■■■■■ 34.5
SF3B1O75533 NUP54-206ENST00000508465 744 ntTSL 34.89□□□□□ -1.634e-6■■■■■ 34.5
SF3B1O75533 TANK-217ENST00000463502 570 ntTSL 34.83□□□□□ -1.644e-6■■■■■ 34.5
SF3B1O75533 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.8□□□□□ -1.644e-7■■■■■ 34.5
SF3B1O75533 CSPP1-205ENST00000521168 1457 ntTSL 1 (best)4.77□□□□□ -1.654e-9■■■■■ 34.5
Retrieved 100 of 46,956 protein–RNA pairs in 4192.5 ms