RNA–Protein interactions for RNA: ENST00000495897.2

PPP3CB-206, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 2

Gene PPP3CB, Length 1,144 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-206ENST00000495897 AEBP2Q6ZN18 517 aaPredicted RBP31.56■■■□□ 2.64
PPP3CB-206ENST00000495897 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
PPP3CB-206ENST00000495897 SENP3Q9H4L4 574 aaPredicted RBP27.07■■□□□ 1.92
PPP3CB-206ENST00000495897 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
PPP3CB-206ENST00000495897 FOXD1Q16676 465 aa25.22■■□□□ 1.63
PPP3CB-206ENST00000495897 MSH5O43196 834 aa23.8■■□□□ 1.4
PPP3CB-206ENST00000495897 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
PPP3CB-206ENST00000495897 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
PPP3CB-206ENST00000495897 PIAS4Q8N2W9 510 aaPredicted RBP23.53■■□□□ 1.36
PPP3CB-206ENST00000495897 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
PPP3CB-206ENST00000495897 ADRA2BP18089 450 aa23.24■■□□□ 1.31
PPP3CB-206ENST00000495897 MAPK8IP2Q13387 824 aaPredicted RBP21.44■■□□□ 1.02
PPP3CB-206ENST00000495897 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
PPP3CB-206ENST00000495897 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
PPP3CB-206ENST00000495897 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
PPP3CB-206ENST00000495897 PPP4R3CPQ6ZMV5 832 aa20.64■□□□□ 0.89
PPP3CB-206ENST00000495897 DCAF8L1A6NGE4 600 aa20.62■□□□□ 0.89
PPP3CB-206ENST00000495897 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
PPP3CB-206ENST00000495897 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
PPP3CB-206ENST00000495897 RNF39Q9H2S5 420 aa20.23■□□□□ 0.83
PPP3CB-206ENST00000495897 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
PPP3CB-206ENST00000495897 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
PPP3CB-206ENST00000495897 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
PPP3CB-206ENST00000495897 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
PPP3CB-206ENST00000495897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
PPP3CB-206ENST00000495897 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
PPP3CB-206ENST00000495897 KCNA4P22459 653 aa19.13■□□□□ 0.65
PPP3CB-206ENST00000495897 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
PPP3CB-206ENST00000495897 CAPN15O75808 1086 aa18.93■□□□□ 0.62
PPP3CB-206ENST00000495897 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
PPP3CB-206ENST00000495897 DSG3P32926 999 aa18.83■□□□□ 0.6
PPP3CB-206ENST00000495897 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
PPP3CB-206ENST00000495897 APLP2Q06481 763 aa18.59■□□□□ 0.57
PPP3CB-206ENST00000495897 POTEHQ6S545 545 aa18.58■□□□□ 0.56
PPP3CB-206ENST00000495897 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
PPP3CB-206ENST00000495897 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
PPP3CB-206ENST00000495897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
PPP3CB-206ENST00000495897 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
PPP3CB-206ENST00000495897 ABCB7O75027 752 aa18.42■□□□□ 0.54
PPP3CB-206ENST00000495897 SAMD1Q6SPF0 538 aaPredicted RBP18.32■□□□□ 0.52
PPP3CB-206ENST00000495897 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
PPP3CB-206ENST00000495897 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
PPP3CB-206ENST00000495897 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
PPP3CB-206ENST00000495897 POLA2Q14181 598 aa17.96■□□□□ 0.47
PPP3CB-206ENST00000495897 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
PPP3CB-206ENST00000495897 CHRDL2Q6WN34 429 aa17.75■□□□□ 0.43
PPP3CB-206ENST00000495897 ZBTB22O15209 634 aa17.6■□□□□ 0.41
PPP3CB-206ENST00000495897 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
PPP3CB-206ENST00000495897 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
PPP3CB-206ENST00000495897 AKT1S1Q96B36 256 aa17.53■□□□□ 0.4
PPP3CB-206ENST00000495897 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
PPP3CB-206ENST00000495897 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
PPP3CB-206ENST00000495897 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
PPP3CB-206ENST00000495897 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
PPP3CB-206ENST00000495897 ATXN8OSP0DMR3 200 aa17.19■□□□□ 0.34
PPP3CB-206ENST00000495897 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
PPP3CB-206ENST00000495897 HAX1O00165 279 aa17.1■□□□□ 0.33
PPP3CB-206ENST00000495897 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPP3CB-206ENST00000495897 FBLN2P98095 1184 aa17.02■□□□□ 0.32
PPP3CB-206ENST00000495897 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
PPP3CB-206ENST00000495897 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
PPP3CB-206ENST00000495897 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
PPP3CB-206ENST00000495897 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
PPP3CB-206ENST00000495897 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
PPP3CB-206ENST00000495897 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
PPP3CB-206ENST00000495897 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
PPP3CB-206ENST00000495897 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
PPP3CB-206ENST00000495897 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
PPP3CB-206ENST00000495897 EVX2Q03828 476 aa16.75■□□□□ 0.27
PPP3CB-206ENST00000495897 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
PPP3CB-206ENST00000495897 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
PPP3CB-206ENST00000495897 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
PPP3CB-206ENST00000495897 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
PPP3CB-206ENST00000495897 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
PPP3CB-206ENST00000495897 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPP3CB-206ENST00000495897 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
PPP3CB-206ENST00000495897 GABBR2O75899 941 aa16.4■□□□□ 0.22
PPP3CB-206ENST00000495897 LHX8Q68G74 356 aa16.21■□□□□ 0.19
PPP3CB-206ENST00000495897 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
PPP3CB-206ENST00000495897 CD44P16070 742 aaKnown RBP16.19■□□□□ 0.18
PPP3CB-206ENST00000495897 CLCN6P51797 869 aa16.09■□□□□ 0.17
PPP3CB-206ENST00000495897 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
PPP3CB-206ENST00000495897 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
PPP3CB-206ENST00000495897 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.15
PPP3CB-206ENST00000495897 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
PPP3CB-206ENST00000495897 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
PPP3CB-206ENST00000495897 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
PPP3CB-206ENST00000495897 ZNF579Q8NAF0 562 aaKnown RBP15.89■□□□□ 0.13
PPP3CB-206ENST00000495897 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
PPP3CB-206ENST00000495897 GALR2O43603 387 aaPredicted RBP15.72■□□□□ 0.11
PPP3CB-206ENST00000495897 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
PPP3CB-206ENST00000495897 PHF12Q96QT6 1004 aa15.63■□□□□ 0.09
PPP3CB-206ENST00000495897 PROM2Q8N271 834 aa15.59■□□□□ 0.09
PPP3CB-206ENST00000495897 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
PPP3CB-206ENST00000495897 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
PPP3CB-206ENST00000495897 PLSCR2Q9NRY7 297 aa15.49■□□□□ 0.07
PPP3CB-206ENST00000495897 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
PPP3CB-206ENST00000495897 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
PPP3CB-206ENST00000495897 FKBP8Q14318 412 aa15.4■□□□□ 0.06
PPP3CB-206ENST00000495897 MS4A3Q96HJ5 214 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 324.9 ms