RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
SPTA1-205ENST00000481212 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
SPTA1-205ENST00000481212 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
SPTA1-205ENST00000481212 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
SPTA1-205ENST00000481212 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
SPTA1-205ENST00000481212 FOXD1Q16676 465 aa21.22■□□□□ 0.99
SPTA1-205ENST00000481212 ADRA2BP18089 450 aa20.86■□□□□ 0.93
SPTA1-205ENST00000481212 PPP6R1Q9UPN7 881 aa20.83■□□□□ 0.93
SPTA1-205ENST00000481212 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
SPTA1-205ENST00000481212 KCNA4P22459 653 aa19.7■□□□□ 0.74
SPTA1-205ENST00000481212 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
SPTA1-205ENST00000481212 MSH5O43196 834 aa19.4■□□□□ 0.7
SPTA1-205ENST00000481212 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
SPTA1-205ENST00000481212 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
SPTA1-205ENST00000481212 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
SPTA1-205ENST00000481212 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
SPTA1-205ENST00000481212 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
SPTA1-205ENST00000481212 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
SPTA1-205ENST00000481212 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
SPTA1-205ENST00000481212 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
SPTA1-205ENST00000481212 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
SPTA1-205ENST00000481212 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
SPTA1-205ENST00000481212 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
SPTA1-205ENST00000481212 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
SPTA1-205ENST00000481212 ZBTB22O15209 634 aa18.09■□□□□ 0.49
SPTA1-205ENST00000481212 FOXD4L1Q9NU39 408 aa18■□□□□ 0.47
SPTA1-205ENST00000481212 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
SPTA1-205ENST00000481212 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SPTA1-205ENST00000481212 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
SPTA1-205ENST00000481212 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
SPTA1-205ENST00000481212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■■□ 21.8
SPTA1-205ENST00000481212 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
SPTA1-205ENST00000481212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
SPTA1-205ENST00000481212 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
SPTA1-205ENST00000481212 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
SPTA1-205ENST00000481212 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
SPTA1-205ENST00000481212 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
SPTA1-205ENST00000481212 APLP2Q06481 763 aa16.87■□□□□ 0.29
SPTA1-205ENST00000481212 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
SPTA1-205ENST00000481212 FKBP8Q14318 412 aa16.67■□□□□ 0.26
SPTA1-205ENST00000481212 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
SPTA1-205ENST00000481212 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
SPTA1-205ENST00000481212 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
SPTA1-205ENST00000481212 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
SPTA1-205ENST00000481212 CAPN15O75808 1086 aa16.46■□□□□ 0.23
SPTA1-205ENST00000481212 POLA2Q14181 598 aa16.36■□□□□ 0.21
SPTA1-205ENST00000481212 FBLN2P98095 1184 aa16.29■□□□□ 0.2
SPTA1-205ENST00000481212 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
SPTA1-205ENST00000481212 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
SPTA1-205ENST00000481212 ABCB7O75027 752 aa16.16■□□□□ 0.18
SPTA1-205ENST00000481212 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
SPTA1-205ENST00000481212 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
SPTA1-205ENST00000481212 RTN4Q9NQC3 1192 aaKnown RBP16.04■□□□□ 0.16
SPTA1-205ENST00000481212 DSG3P32926 999 aa16.03■□□□□ 0.16
SPTA1-205ENST00000481212 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
SPTA1-205ENST00000481212 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
SPTA1-205ENST00000481212 PROM2Q8N271 834 aa15.93■□□□□ 0.14
SPTA1-205ENST00000481212 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
SPTA1-205ENST00000481212 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
SPTA1-205ENST00000481212 SPDYE2BA6NHP3 402 aa15.72■□□□□ 0.11
SPTA1-205ENST00000481212 SPDYE6P0CI01 402 aa15.72■□□□□ 0.11
SPTA1-205ENST00000481212 SPDYE2Q495Y8 402 aa15.72■□□□□ 0.11
SPTA1-205ENST00000481212 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
SPTA1-205ENST00000481212 VASPP50552 380 aaPredicted RBP15.7■□□□□ 0.1
SPTA1-205ENST00000481212 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
SPTA1-205ENST00000481212 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
SPTA1-205ENST00000481212 IFNLR1Q8IU57 520 aaPredicted RBP15.53■□□□□ 0.08
SPTA1-205ENST00000481212 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
SPTA1-205ENST00000481212 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
SPTA1-205ENST00000481212 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
SPTA1-205ENST00000481212 MIER1Q8N108 512 aa15.35■□□□□ 0.05
SPTA1-205ENST00000481212 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
SPTA1-205ENST00000481212 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
SPTA1-205ENST00000481212 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
SPTA1-205ENST00000481212 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
SPTA1-205ENST00000481212 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
SPTA1-205ENST00000481212 PKD2Q13563 968 aa15.19■□□□□ 0.02
SPTA1-205ENST00000481212 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
SPTA1-205ENST00000481212 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
SPTA1-205ENST00000481212 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
SPTA1-205ENST00000481212 CLEC11AQ9Y240 323 aa15.07■□□□□ 0
SPTA1-205ENST00000481212 ECM2O94769 699 aaPredicted RBP15.06■□□□□ 0
SPTA1-205ENST00000481212 REM2Q8IYK8 340 aaPredicted RBP15.05■□□□□ -0
SPTA1-205ENST00000481212 PRR29P0C7W0 189 aa15.02■□□□□ -0
SPTA1-205ENST00000481212 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
SPTA1-205ENST00000481212 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
SPTA1-205ENST00000481212 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
SPTA1-205ENST00000481212 GSE1Q14687 1217 aa14.85□□□□□ -0.03
SPTA1-205ENST00000481212 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
SPTA1-205ENST00000481212 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
SPTA1-205ENST00000481212 RGL2O15211 777 aa14.84□□□□□ -0.03
SPTA1-205ENST00000481212 NUBP1P53384 320 aa14.83□□□□□ -0.04
SPTA1-205ENST00000481212 DCAF8Q5TAQ9 597 aa14.81□□□□□ -0.04
SPTA1-205ENST00000481212 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
SPTA1-205ENST00000481212 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.05
SPTA1-205ENST00000481212 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
SPTA1-205ENST00000481212 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
SPTA1-205ENST00000481212 FAM212AQ96EL1 285 aa14.72□□□□□ -0.05
SPTA1-205ENST00000481212 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
SPTA1-205ENST00000481212 ABCC9O60706 1549 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms