RNA–Protein interactions for RNA: ENST00000426440.5

ARPC3-202, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 3

Gene ARPC3, Length 349 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-202ENST00000426440 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
ARPC3-202ENST00000426440 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
ARPC3-202ENST00000426440 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
ARPC3-202ENST00000426440 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
ARPC3-202ENST00000426440 FOXD1Q16676 465 aa22.12■■□□□ 1.13
ARPC3-202ENST00000426440 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
ARPC3-202ENST00000426440 PIAS4Q8N2W9 510 aaPredicted RBP20.73■□□□□ 0.91
ARPC3-202ENST00000426440 MSH5O43196 834 aa20.72■□□□□ 0.91
ARPC3-202ENST00000426440 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
ARPC3-202ENST00000426440 ADRA2BP18089 450 aa20.68■□□□□ 0.9
ARPC3-202ENST00000426440 POTEDQ86YR6 584 aa20.07■□□□□ 0.8
ARPC3-202ENST00000426440 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
ARPC3-202ENST00000426440 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
ARPC3-202ENST00000426440 DMRT2Q9Y5R5 561 aa18.85■□□□□ 0.61
ARPC3-202ENST00000426440 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
ARPC3-202ENST00000426440 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
ARPC3-202ENST00000426440 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
ARPC3-202ENST00000426440 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
ARPC3-202ENST00000426440 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
ARPC3-202ENST00000426440 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
ARPC3-202ENST00000426440 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
ARPC3-202ENST00000426440 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
ARPC3-202ENST00000426440 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
ARPC3-202ENST00000426440 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
ARPC3-202ENST00000426440 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
ARPC3-202ENST00000426440 KCNA4P22459 653 aa17.39■□□□□ 0.37
ARPC3-202ENST00000426440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■□□□□ 11
ARPC3-202ENST00000426440 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
ARPC3-202ENST00000426440 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
ARPC3-202ENST00000426440 CAPN15O75808 1086 aa16.72■□□□□ 0.27
ARPC3-202ENST00000426440 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
ARPC3-202ENST00000426440 APLP2Q06481 763 aa16.58■□□□□ 0.24
ARPC3-202ENST00000426440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
ARPC3-202ENST00000426440 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
ARPC3-202ENST00000426440 DSG3P32926 999 aa16.56■□□□□ 0.24
ARPC3-202ENST00000426440 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
ARPC3-202ENST00000426440 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
ARPC3-202ENST00000426440 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
ARPC3-202ENST00000426440 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
ARPC3-202ENST00000426440 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
ARPC3-202ENST00000426440 ABCB7O75027 752 aa16.33■□□□□ 0.2
ARPC3-202ENST00000426440 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
ARPC3-202ENST00000426440 POLA2Q14181 598 aa16.02■□□□□ 0.16
ARPC3-202ENST00000426440 ZBTB22O15209 634 aa15.96■□□□□ 0.15
ARPC3-202ENST00000426440 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
ARPC3-202ENST00000426440 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
ARPC3-202ENST00000426440 POTEHQ6S545 545 aa15.75■□□□□ 0.11
ARPC3-202ENST00000426440 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
ARPC3-202ENST00000426440 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
ARPC3-202ENST00000426440 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
ARPC3-202ENST00000426440 AKT1S1Q96B36 256 aa15.48■□□□□ 0.07
ARPC3-202ENST00000426440 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
ARPC3-202ENST00000426440 FBLN2P98095 1184 aa15.39■□□□□ 0.05
ARPC3-202ENST00000426440 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
ARPC3-202ENST00000426440 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
ARPC3-202ENST00000426440 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
ARPC3-202ENST00000426440 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
ARPC3-202ENST00000426440 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
ARPC3-202ENST00000426440 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
ARPC3-202ENST00000426440 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
ARPC3-202ENST00000426440 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
ARPC3-202ENST00000426440 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
ARPC3-202ENST00000426440 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
ARPC3-202ENST00000426440 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
ARPC3-202ENST00000426440 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
ARPC3-202ENST00000426440 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.01
ARPC3-202ENST00000426440 CLEC11AQ9Y240 323 aa14.94□□□□□ -0.02
ARPC3-202ENST00000426440 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
ARPC3-202ENST00000426440 HAX1O00165 279 aa14.82□□□□□ -0.04
ARPC3-202ENST00000426440 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
ARPC3-202ENST00000426440 PRKAR2AP13861 404 aaKnown RBP14.78□□□□□ -0.04
ARPC3-202ENST00000426440 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
ARPC3-202ENST00000426440 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
ARPC3-202ENST00000426440 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
ARPC3-202ENST00000426440 EVX2Q03828 476 aa14.58□□□□□ -0.08
ARPC3-202ENST00000426440 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
ARPC3-202ENST00000426440 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
ARPC3-202ENST00000426440 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
ARPC3-202ENST00000426440 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
ARPC3-202ENST00000426440 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
ARPC3-202ENST00000426440 GABBR2O75899 941 aa14.29□□□□□ -0.12
ARPC3-202ENST00000426440 PROM2Q8N271 834 aa14.18□□□□□ -0.14
ARPC3-202ENST00000426440 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
ARPC3-202ENST00000426440 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
ARPC3-202ENST00000426440 CLCN6P51797 869 aa14.11□□□□□ -0.15
ARPC3-202ENST00000426440 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
ARPC3-202ENST00000426440 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
ARPC3-202ENST00000426440 MNX1P50219 401 aaPredicted RBP14.05□□□□□ -0.16
ARPC3-202ENST00000426440 POTEIP0CG38 1075 aa13.96□□□□□ -0.17
ARPC3-202ENST00000426440 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
ARPC3-202ENST00000426440 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
ARPC3-202ENST00000426440 FKBP8Q14318 412 aa13.93□□□□□ -0.18
ARPC3-202ENST00000426440 PHF12Q96QT6 1004 aa13.93□□□□□ -0.18
ARPC3-202ENST00000426440 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
ARPC3-202ENST00000426440 MIER1Q8N108 512 aa13.91□□□□□ -0.18
ARPC3-202ENST00000426440 LHX8Q68G74 356 aa13.9□□□□□ -0.18
ARPC3-202ENST00000426440 TSPYL2Q9H2G4 693 aaPredicted RBP13.84□□□□□ -0.19
ARPC3-202ENST00000426440 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
ARPC3-202ENST00000426440 MS4A3Q96HJ5 214 aa13.75□□□□□ -0.21
ARPC3-202ENST00000426440 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms