Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BTN3A1-208ENST00000476549 1758 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 SP3P-201ENST00000414049 2065 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 AC112176.1-201ENST00000565428 3024 ntBASIC10.93□□□□□ -0.66
NPIPA3F8WFD2 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CD83-202ENST00000612003 2307 ntTSL 4 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 FP885919.1-201ENST00000331259 1038 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 MYL5-201ENST00000400159 666 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 ACTG1P12-201ENST00000423183 1166 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 LINC00539-202ENST00000423575 699 ntTSL 3 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC113174.1-201ENST00000433897 105 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 LSP1P3-201ENST00000449530 208 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC007690.1-201ENST00000451924 468 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 RN7SL69P-201ENST00000468423 272 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 RN7SL743P-201ENST00000475032 298 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 TPI1P2-201ENST00000491343 752 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 GM2AP1-201ENST00000491450 521 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC027373.1-201ENST00000564694 1142 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC022167.1-201ENST00000564919 409 ntTSL 3 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 RN7SL811P-201ENST00000580735 298 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CD300LF-210ENST00000583937 1275 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 LINC01198-206ENST00000595532 1125 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AC083841.4-201ENST00000637396 352 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CARS-216ENST00000639317 135 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 MAMLD1-205ENST00000432680 3224 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 AP000350.2-201ENST00000439492 1763 ntBASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 MFSD6-202ENST00000392328 4797 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 BCAR3-203ENST00000370244 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
NPIPA3F8WFD2 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 LGR6-201ENST00000255432 3406 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ASB9-201ENST00000380483 1612 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 SLC22A8-205ENST00000535878 1387 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CAST-233ENST00000510756 2310 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 STK26-203ENST00000394335 3017 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AL512310.7-201ENST00000547785 2268 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 BCL2L13-213ENST00000538149 4797 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 MIR497-201ENST00000385056 112 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 KRT8P40-201ENST00000392131 563 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 RPLP0P2-204ENST00000490750 961 ntBASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 SEMA6A-AS1-205ENST00000512128 479 ntTSL 2 BASIC10.91□□□□□ -0.66
NPIPA3F8WFD2 RCC2P4-201ENST00000513160 1042 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms