Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LSINCT5-201ENST00000626215 2647 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 Metazoa_SRP.1-201ENST00000360440 343 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 AC104772.2-201ENST00000412747 613 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 AC245052.2-201ENST00000413723 327 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 SLC6A1-AS1-201ENST00000414969 584 ntTSL 4 BASIC12.5□□□□□ -0.41
MTHFRP42898 AC068620.1-201ENST00000470544 798 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 CLCF1-202ENST00000533438 967 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 MAX-216ENST00000556979 615 ntTSL 3 BASIC12.5□□□□□ -0.41
MTHFRP42898 TREML3P-202ENST00000564680 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC12.5□□□□□ -0.41
MTHFRP42898 AC136944.3-202ENST00000567422 509 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC12.5□□□□□ -0.41
MTHFRP42898 uc_338.24-201ENST00000617802 182 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 EPC2-203ENST00000409654 1624 ntTSL 3 BASIC12.5□□□□□ -0.41
MTHFRP42898 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 PSIP1-205ENST00000397519 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 PKD2-205ENST00000508588 1720 ntTSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
MTHFRP42898 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC12.49□□□□□ -0.41
MTHFRP42898 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 RAD51-202ENST00000382643 1588 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC12.49□□□□□ -0.41
MTHFRP42898 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC12.49□□□□□ -0.41
MTHFRP42898 FKBP9P1-201ENST00000441699 1491 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 EEF1GP5-201ENST00000434365 1310 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 CHCHD2P1-201ENST00000429986 443 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 LINC01682-201ENST00000435973 385 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 MRPS11P1-201ENST00000437558 522 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 CFL1P2-201ENST00000440986 684 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 AL365357.1-201ENST00000455621 357 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 RPL7AP4-201ENST00000483820 769 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 AC007849.2-201ENST00000484597 471 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 AC098976.2-201ENST00000514144 881 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 AF186192.1-201ENST00000525376 572 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC12.49□□□□□ -0.41
MTHFRP42898 AC016866.1-201ENST00000584252 659 ntTSL 5 BASIC12.49□□□□□ -0.41
MTHFRP42898 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC12.49□□□□□ -0.41
MTHFRP42898 DNAJB5-AS1-201ENST00000626300 749 ntTSL 3 BASIC12.49□□□□□ -0.41
MTHFRP42898 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
MTHFRP42898 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC12.49□□□□□ -0.41
MTHFRP42898 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
MTHFRP42898 AC099521.2-201ENST00000619354 2036 ntBASIC12.49□□□□□ -0.41
MTHFRP42898 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MTHFRP42898 PIK3R3-204ENST00000423209 1884 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MTHFRP42898 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms