Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
MTHFRP42898 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC12.52□□□□□ -0.41
MTHFRP42898 LINC00473-204ENST00000584179 1717 ntTSL 5 BASIC12.52□□□□□ -0.41
MTHFRP42898 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 AC011511.5-201ENST00000589379 3219 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 MIR182-201ENST00000385255 110 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 MRAP-203ENST00000399784 1000 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 MIR497HG-201ENST00000443997 770 ntTSL 3 BASIC12.52□□□□□ -0.41
MTHFRP42898 MRPL51P2-201ENST00000450190 376 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 SURF6P1-201ENST00000451854 827 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 RN7SL150P-201ENST00000462298 262 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC12.52□□□□□ -0.41
MTHFRP42898 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC12.52□□□□□ -0.41
MTHFRP42898 RCC2P4-201ENST00000513160 1042 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 BCAR1P2-201ENST00000557707 636 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC12.52□□□□□ -0.41
MTHFRP42898 AC020663.1-201ENST00000588099 556 ntTSL 4 BASIC12.52□□□□□ -0.41
MTHFRP42898 AL391669.1-201ENST00000619829 285 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 FP236240.4-201ENST00000624353 373 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
MTHFRP42898 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC12.52□□□□□ -0.41
MTHFRP42898 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
MTHFRP42898 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.52□□□□□ -0.41
MTHFRP42898 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 IMPDH1P10-201ENST00000440965 1542 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 AC018737.2-201ENST00000624478 1512 ntBASIC12.52□□□□□ -0.41
MTHFRP42898 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MTHFRP42898 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC12.52□□□□□ -0.41
MTHFRP42898 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 GBP1P1-201ENST00000394662 1740 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MTHFRP42898 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MTHFRP42898 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 CNN2P4-201ENST00000396461 904 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 AL732414.1-201ENST00000413346 573 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 HNRNPA1P49-201ENST00000421336 904 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 PPIEL-201ENST00000427240 813 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 GAMTP2-201ENST00000430917 463 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 AP001271.1-201ENST00000445532 206 ntTSL 3 BASIC12.51□□□□□ -0.41
MTHFRP42898 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 BRD9P2-201ENST00000506203 239 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 AC233724.12-201ENST00000512227 594 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MTHFRP42898 AC083841.3-202ENST00000519411 349 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 AC026904.4-201ENST00000523038 559 ntTSL 4 BASIC12.51□□□□□ -0.41
MTHFRP42898 AC108482.1-201ENST00000523413 722 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 LMO3-211ENST00000534946 1016 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 AL357137.1-201ENST00000604645 203 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 Z98752.4-201ENST00000635579 588 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 PKP4P1-201ENST00000426801 2158 ntBASIC12.51□□□□□ -0.41
MTHFRP42898 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
MTHFRP42898 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.51□□□□□ -0.41
MTHFRP42898 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MTHFRP42898 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MTHFRP42898 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MTHFRP42898 AC243964.3-201ENST00000623022 2028 ntBASIC12.5□□□□□ -0.41
MTHFRP42898 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC12.5□□□□□ -0.41
MTHFRP42898 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
MTHFRP42898 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms