Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 LINC00539-204ENST00000608957 869 ntTSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 FAM25BP-201ENST00000623997 268 ntBASIC12.56□□□□□ -0.4
MTHFRP42898 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MTHFRP42898 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.56□□□□□ -0.4
MTHFRP42898 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC12.56□□□□□ -0.4
MTHFRP42898 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MTHFRP42898 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 AC008659.1-201ENST00000501834 1458 ntTSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 LST1-201ENST00000211921 504 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 PI3-201ENST00000243924 577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 HNRNPA1P34-201ENST00000391992 950 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 HBA2-202ENST00000397806 513 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 CNN2P9-201ENST00000417134 909 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 GAPDHP2-201ENST00000432206 998 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 SLC25A5P5-201ENST00000435239 897 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 RN7SL299P-201ENST00000464573 280 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 AP000926.2-201ENST00000469983 358 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 RN7SL709P-201ENST00000478855 300 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 ALG1L13P-201ENST00000518201 521 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 CD63-207ENST00000548898 727 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 DYNLL1P2-201ENST00000554807 270 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 AC026826.2-201ENST00000560455 214 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 AC012498.2-201ENST00000604586 372 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 AC026367.1-201ENST00000605329 611 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MTHFRP42898 MIR6131-201ENST00000611729 109 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 AC239859.5-201ENST00000614100 1232 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 AL161669.3-201ENST00000618272 777 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 Metazoa_SRP.95-201ENST00000619648 282 ntBASIC12.55□□□□□ -0.4
MTHFRP42898 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.55□□□□□ -0.4
MTHFRP42898 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MTHFRP42898 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC12.55□□□□□ -0.4
MTHFRP42898 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.55□□□□□ -0.4
MTHFRP42898 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.54□□□□□ -0.4
MTHFRP42898 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
MTHFRP42898 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC12.54□□□□□ -0.4
MTHFRP42898 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
MTHFRP42898 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MTHFRP42898 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms