Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
S4R3C0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.95■□□□□ 0.3
S4R3C0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.95■□□□□ 0.3
S4R3C0 AL138724.1-201ENST00000606771 1088 ntBASIC16.95■□□□□ 0.3
S4R3C0 CA15P2-201ENST00000611168 834 ntBASIC16.95■□□□□ 0.3
S4R3C0 AC011298.3-201ENST00000615796 283 ntBASIC16.95■□□□□ 0.3
S4R3C0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
S4R3C0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.95■□□□□ 0.3
S4R3C0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
S4R3C0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.94■□□□□ 0.3
S4R3C0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.94■□□□□ 0.3
S4R3C0 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.94■□□□□ 0.3
S4R3C0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
S4R3C0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
S4R3C0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
S4R3C0 AC135279.3-201ENST00000610945 1311 ntBASIC16.94■□□□□ 0.3
S4R3C0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.94■□□□□ 0.3
S4R3C0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.93■□□□□ 0.3
S4R3C0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
S4R3C0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
S4R3C0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 PBX2P1-201ENST00000493219 1291 ntBASIC16.93■□□□□ 0.3
S4R3C0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.93■□□□□ 0.3
S4R3C0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S4R3C0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
S4R3C0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
S4R3C0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.92■□□□□ 0.3
S4R3C0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
S4R3C0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.92■□□□□ 0.3
S4R3C0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.92■□□□□ 0.3
S4R3C0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.92■□□□□ 0.3
S4R3C0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
S4R3C0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.92■□□□□ 0.3
S4R3C0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.92■□□□□ 0.3
S4R3C0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.92■□□□□ 0.3
S4R3C0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.92■□□□□ 0.3
S4R3C0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
S4R3C0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.91■□□□□ 0.3
S4R3C0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
S4R3C0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.91■□□□□ 0.3
S4R3C0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
S4R3C0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.91■□□□□ 0.3
S4R3C0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
S4R3C0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
S4R3C0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.9■□□□□ 0.3
S4R3C0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.9■□□□□ 0.3
S4R3C0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.9■□□□□ 0.3
S4R3C0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.9■□□□□ 0.3
S4R3C0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.9■□□□□ 0.3
S4R3C0 AC008764.7-201ENST00000593779 1081 ntBASIC16.9■□□□□ 0.3
S4R3C0 AC110285.6-201ENST00000617652 491 ntBASIC16.9■□□□□ 0.3
S4R3C0 AC087239.1-201ENST00000622671 572 ntBASIC16.9■□□□□ 0.3
S4R3C0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S4R3C0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
S4R3C0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
S4R3C0 CLDN5-201ENST00000403084 2357 ntBASIC16.89■□□□□ 0.3
S4R3C0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
S4R3C0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S4R3C0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms