Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGA11Q9Y5H2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 UNC93B3-201ENST00000308076 687 ntBASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 AP005435.1-201ENST00000529293 1178 ntBASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGA11Q9Y5H2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 SLC47A1P1-202ENST00000449666 945 ntBASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGA11Q9Y5H2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 OR7E47P-201ENST00000546390 1422 ntBASIC20.83■□□□□ 0.93
PCDHGA11Q9Y5H2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHGA11Q9Y5H2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGA11Q9Y5H2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 AL136162.1-201ENST00000607711 1078 ntBASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA11Q9Y5H2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 MIR4767-201ENST00000582827 78 ntBASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA11Q9Y5H2 AC135279.3-201ENST00000610945 1311 ntBASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 BX842568.3-201ENST00000418104 571 ntBASIC20.79■□□□□ 0.92
PCDHGA11Q9Y5H2 AC024257.2-201ENST00000549699 147 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms