Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 AC087239.1-201ENST00000622671 572 ntBASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LRTM1Q9HBL6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 AC010525.1-201ENST00000585559 441 ntBASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM1Q9HBL6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 AC010141.3-201ENST00000456659 717 ntBASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRTM1Q9HBL6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.65■□□□□ 0.9
LRTM1Q9HBL6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.64■□□□□ 0.9
LRTM1Q9HBL6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRTM1Q9HBL6 SYT6-210ENST00000641643 1587 ntBASIC20.64■□□□□ 0.9
LRTM1Q9HBL6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 AL138724.1-201ENST00000606771 1088 ntBASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 AC026471.6-201ENST00000622954 1905 ntBASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
LRTM1Q9HBL6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 MIR4466-201ENST00000606121 54 ntBASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms