Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
S1PR3Q99500 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
S1PR3Q99500 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
S1PR3Q99500 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.73■□□□□ 0.43
S1PR3Q99500 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.72■□□□□ 0.43
S1PR3Q99500 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.72■□□□□ 0.43
S1PR3Q99500 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
S1PR3Q99500 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
S1PR3Q99500 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.71■□□□□ 0.43
S1PR3Q99500 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.71■□□□□ 0.43
S1PR3Q99500 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
S1PR3Q99500 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
S1PR3Q99500 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.71■□□□□ 0.43
S1PR3Q99500 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.71■□□□□ 0.43
S1PR3Q99500 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
S1PR3Q99500 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
S1PR3Q99500 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
S1PR3Q99500 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.71■□□□□ 0.43
S1PR3Q99500 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.71■□□□□ 0.42
S1PR3Q99500 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.71■□□□□ 0.42
S1PR3Q99500 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
S1PR3Q99500 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
S1PR3Q99500 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.7■□□□□ 0.42
S1PR3Q99500 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.7■□□□□ 0.42
S1PR3Q99500 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
S1PR3Q99500 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
S1PR3Q99500 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
S1PR3Q99500 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
S1PR3Q99500 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.69■□□□□ 0.42
S1PR3Q99500 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.69■□□□□ 0.42
S1PR3Q99500 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.69■□□□□ 0.42
S1PR3Q99500 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 SERBP1P1-201ENST00000396021 1160 ntBASIC17.69■□□□□ 0.42
S1PR3Q99500 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
S1PR3Q99500 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 AC079089.2-201ENST00000531211 1277 ntBASIC17.69■□□□□ 0.42
S1PR3Q99500 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.69■□□□□ 0.42
S1PR3Q99500 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.69■□□□□ 0.42
S1PR3Q99500 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
S1PR3Q99500 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
S1PR3Q99500 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
S1PR3Q99500 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
S1PR3Q99500 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
S1PR3Q99500 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
S1PR3Q99500 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
S1PR3Q99500 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
S1PR3Q99500 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
S1PR3Q99500 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.68■□□□□ 0.42
S1PR3Q99500 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.68■□□□□ 0.42
S1PR3Q99500 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.68■□□□□ 0.42
S1PR3Q99500 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms