Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDK5RAP1Q96SZ6 AC055733.4-201ENST00000638462 1354 ntBASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 KRT19P1-201ENST00000405746 1186 ntBASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 AC022517.1-201ENST00000592429 346 ntBASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 KRT87P-202ENST00000534226 1464 ntBASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.38■■□□□ 1.17
CDK5RAP1Q96SZ6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 AP004607.4-201ENST00000530158 1459 ntBASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.37■■□□□ 1.17
CDK5RAP1Q96SZ6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 C1orf229-201ENST00000623686 2258 ntBASIC22.36■■□□□ 1.17
CDK5RAP1Q96SZ6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 AC004854.2-201ENST00000608450 1441 ntBASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CDK5RAP1Q96SZ6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 AP006587.3-201ENST00000525742 1516 ntBASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CDK5RAP1Q96SZ6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.33■■□□□ 1.17
CDK5RAP1Q96SZ6 AL137784.2-201ENST00000607332 1000 ntBASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms