Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BBS4Q96RK4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BBS4Q96RK4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.38■□□□□ 0.85
BBS4Q96RK4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BBS4Q96RK4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.37■□□□□ 0.85
BBS4Q96RK4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BBS4Q96RK4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.37■□□□□ 0.85
BBS4Q96RK4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 BX842568.3-201ENST00000418104 571 ntBASIC20.36■□□□□ 0.85
BBS4Q96RK4 PBX2P1-201ENST00000493219 1291 ntBASIC20.36■□□□□ 0.85
BBS4Q96RK4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
BBS4Q96RK4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BBS4Q96RK4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 AC233992.3-201ENST00000607491 485 ntBASIC20.35■□□□□ 0.85
BBS4Q96RK4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BBS4Q96RK4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
BBS4Q96RK4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
BBS4Q96RK4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BBS4Q96RK4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
BBS4Q96RK4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.34■□□□□ 0.85
BBS4Q96RK4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BBS4Q96RK4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BBS4Q96RK4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.33■□□□□ 0.85
BBS4Q96RK4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.33■□□□□ 0.85
BBS4Q96RK4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.33■□□□□ 0.85
BBS4Q96RK4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BBS4Q96RK4 AC126544.1-201ENST00000580842 1059 ntBASIC20.33■□□□□ 0.85
BBS4Q96RK4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BBS4Q96RK4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BBS4Q96RK4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
BBS4Q96RK4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
BBS4Q96RK4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms