Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 AC055733.4-201ENST00000638462 1354 ntBASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 AC012676.1-201ENST00000574705 1949 ntBASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ECHDC3Q96DC8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 AL162430.1-201ENST00000480705 870 ntBASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ECHDC3Q96DC8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 AC242852.2-201ENST00000615738 1807 ntBASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ECHDC3Q96DC8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 GUSBP5-202ENST00000510805 1989 ntBASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ECHDC3Q96DC8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 AC092053.2-201ENST00000640557 1818 ntBASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ECHDC3Q96DC8 AP006587.3-201ENST00000525742 1516 ntBASIC21.58■■□□□ 1.04
ECHDC3Q96DC8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC3Q96DC8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC3Q96DC8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC3Q96DC8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ECHDC3Q96DC8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 KRT18P5-201ENST00000436075 1291 ntBASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ECHDC3Q96DC8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms