Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40AQ8WXH6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB40AQ8WXH6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB40AQ8WXH6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40AQ8WXH6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RAB40AQ8WXH6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40AQ8WXH6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 LINC01960-201ENST00000563759 1884 ntBASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB40AQ8WXH6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 SRD5A1P1-201ENST00000442297 786 ntBASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 AL139246.5-201ENST00000606645 996 ntBASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAB40AQ8WXH6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB40AQ8WXH6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB40AQ8WXH6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 AC096631.2-201ENST00000436136 790 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms