Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RETREG2Q8NC44 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RETREG2Q8NC44 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.39■■□□□ 1.5
RETREG2Q8NC44 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RETREG2Q8NC44 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RETREG2Q8NC44 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.39■■□□□ 1.5
RETREG2Q8NC44 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.39■■□□□ 1.5
RETREG2Q8NC44 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 AC006015.1-201ENST00000429970 570 ntBASIC24.39■■□□□ 1.49
RETREG2Q8NC44 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RETREG2Q8NC44 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.38■■□□□ 1.49
RETREG2Q8NC44 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RETREG2Q8NC44 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 CLDN5-201ENST00000403084 2357 ntBASIC24.36■■□□□ 1.49
RETREG2Q8NC44 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 AC087239.1-201ENST00000622671 572 ntBASIC24.36■■□□□ 1.49
RETREG2Q8NC44 LINC00565-201ENST00000562710 2331 ntBASIC24.36■■□□□ 1.49
RETREG2Q8NC44 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RETREG2Q8NC44 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 AC242852.2-201ENST00000615738 1807 ntBASIC24.35■■□□□ 1.49
RETREG2Q8NC44 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.35■■□□□ 1.49
RETREG2Q8NC44 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RETREG2Q8NC44 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.34■■□□□ 1.49
RETREG2Q8NC44 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.34■■□□□ 1.49
RETREG2Q8NC44 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RETREG2Q8NC44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms